RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 GPR142Q7Z601 462 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 ABRAQ8N0Z2 381 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 SAMD3Q8N6K7 520 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 NECAB1Q8N987 351 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 RGS22Q8NE09 1264 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 CD99L2Q8TCZ2 262 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 TMX3Q96JJ7 454 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 SLC26A6Q9BXS9 759 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 ACAD9Q9H845 621 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 EFCC1Q9HA90 598 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 RNF146Q9NTX7 359 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 RIPK3Q9Y572 518 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 PCDHA1Q9Y5I3 950 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 IVNS1ABPQ9Y6Y0 642 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 STK36Q9NRP7 1315 aa12.1□□□□□ -0.47
LRRC28-204ENST00000558172 ZSWIM8A7E2V4 1837 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 ZNF236Q9UL36 1845 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 CD2BP2O95400 341 aaKnown RBP12.09□□□□□ -0.47
LRRC28-204ENST00000558172 DEXIO95424 95 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 FCER1AP12319 257 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 PTPREP23469 700 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 LBX1P52954 281 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 PRMT2P55345 433 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 KCTD2Q14681 263 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 USH1GQ495M9 461 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 WDR78Q5VTH9 848 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 MCF2L2Q86YR7 1114 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 CCDC83Q8IWF9 413 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 PIBF1Q8WXW3 757 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 WASF1Q92558 559 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 PHKBQ93100 1093 aa12.09□□□□□ -0.47
LRRC28-204ENST00000558172 MAP3K20Q9NYL2 800 aaKnown RBP12.09□□□□□ -0.47
LRRC28-204ENST00000558172 hCG_1642624A0A1W2PR95 340 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 SLC15A5A6NIM6 579 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 K7ELQ4 463 aaPredicted RBP12.08□□□□□ -0.48
LRRC28-204ENST00000558172 PPP1R11O60927 126 aaPredicted RBP12.08□□□□□ -0.48
LRRC28-204ENST00000558172 CTDNEP1O95476 244 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 SCG2P13521 617 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 TEX2Q8IWB9 1127 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 HSCBQ8IWL3 235 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 FAM177A1Q8N128 213 aaPredicted RBP12.08□□□□□ -0.48
LRRC28-204ENST00000558172 ANKRD35Q8N283 1001 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 NSUN7Q8NE18 718 aaKnown RBP12.08□□□□□ -0.48
LRRC28-204ENST00000558172 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
LRRC28-204ENST00000558172 SOCS4Q8WXH5 440 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 DDX11Q96FC9 970 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 MMP19Q99542 508 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 NUDT12Q9BQG2 462 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 PRDM10Q9NQV6 1147 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 HOMER2Q9NSB8 354 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 BARHL2Q9NY43 387 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 SLC5A4Q9NY91 659 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 PFASO15067 1338 aa12.08□□□□□ -0.48
LRRC28-204ENST00000558172 XBP1P17861 261 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 CTGFP29279 349 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 HMGN5P82970 282 aaKnown RBP12.07□□□□□ -0.48
LRRC28-204ENST00000558172 GRB14Q14449 540 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 PKN1Q16512 942 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 MUM1L1Q5H9M0 696 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 HEATR3Q7Z4Q2 680 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 SMARCC2Q8TAQ2 1214 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 CLEC4DQ8WXI8 215 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 ARHGAP39Q9C0H5 1083 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 GLT8D2Q9H1C3 349 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 SH3GLB2Q9NR46 395 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 ORC3Q9UBD5 711 aaPredicted RBP12.07□□□□□ -0.48
LRRC28-204ENST00000558172 SRRDQ9UH36 339 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 GJD2Q9UKL4 321 aa12.07□□□□□ -0.48
LRRC28-204ENST00000558172 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.07□□□□□ -0.48
LRRC28-204ENST00000558172 PTPDC1A2A3K4 754 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 ADORA2AP29274 412 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 RGS2P41220 211 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 MRPL12P52815 198 aaKnown RBP12.06□□□□□ -0.48
LRRC28-204ENST00000558172 NAPAP54920 295 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 GHRHRQ02643 423 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 ST3GAL1Q11201 340 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 MAP2K5Q13163 448 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 CUL4AQ13619 759 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 MORN1Q5T089 497 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 WWC2Q6AWC2 1192 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 RNF207Q6ZRF8 634 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 DPP9Q86TI2 863 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 CCDC148Q8NFR7 591 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 A1CFQ9NQ94 594 aaKnown RBP12.06□□□□□ -0.48
LRRC28-204ENST00000558172 CYP39A1Q9NYL5 469 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 DIS3Q9Y2L1 958 aaKnown RBP12.06□□□□□ -0.48
LRRC28-204ENST00000558172 KIF3AQ9Y496 699 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 TRIM17Q9Y577 477 aa12.06□□□□□ -0.48
LRRC28-204ENST00000558172 LCTP09848 1927 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 MCM3APO60318 1980 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 ESYT2A0FGR8 921 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 GCOM1H8Y6P7 765 aaPredicted RBP12.05□□□□□ -0.48
LRRC28-204ENST00000558172 STXBP3O00186 592 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 NFIBO00712 420 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
LRRC28-204ENST00000558172 HOXC6P09630 235 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 POLR2MP0CAP2 368 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms