RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FAM177A1Q8N128 213 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-234ENST00000557703 ANKRD35Q8N283 1001 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 ARMC5Q96C12 935 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 AGBL1Q96MI9 1066 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 TBC1D32Q96NH3 1257 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 RNF146Q9NTX7 359 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 NRBP1Q9UHY1 535 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 BAZ2BQ9UIF8 2168 aaKnown RBP15.85■□□□□ 0.13
SHMT2-234ENST00000557703 DNAJC25-GNG10A0A024R161 153 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 B4DLN1 442 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 CYTH3O43739 400 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 MRPL12P52815 198 aaKnown RBP15.85■□□□□ 0.13
SHMT2-234ENST00000557703 UBXN2AP68543 259 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 CAP1Q01518 475 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 GHRHRQ02643 423 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 CCDC174Q6PII3 467 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 MYL10Q9BUA6 226 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 GLT8D2Q9H1C3 349 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 RIPK3Q9Y572 518 aa15.85■□□□□ 0.13
SHMT2-234ENST00000557703 PEX10O60683 326 aa15.84■□□□□ 0.13
SHMT2-234ENST00000557703 CDKL5O76039 1030 aa15.84■□□□□ 0.13
SHMT2-234ENST00000557703 HMGCRP04035 888 aa15.84■□□□□ 0.13
SHMT2-234ENST00000557703 TNS4Q8IZW8 715 aa15.84■□□□□ 0.13
SHMT2-234ENST00000557703 SRBD1Q8N5C6 995 aaKnown RBP15.84■□□□□ 0.13
SHMT2-234ENST00000557703 MPHOSPH6Q99547 160 aaKnown RBP15.84■□□□□ 0.13
SHMT2-234ENST00000557703 VAT1LQ9HCJ6 419 aa15.84■□□□□ 0.13
SHMT2-234ENST00000557703 ADD3Q9UEY8 706 aaKnown RBP15.84■□□□□ 0.13
SHMT2-234ENST00000557703 GABRQQ9UN88 632 aa15.84■□□□□ 0.13
SHMT2-234ENST00000557703 HPS5Q9UPZ3 1129 aa15.84■□□□□ 0.13
SHMT2-234ENST00000557703 PCDHA1Q9Y5I3 950 aa15.84■□□□□ 0.13
SHMT2-234ENST00000557703 PTCH2Q9Y6C5 1203 aa15.84■□□□□ 0.13
SHMT2-234ENST00000557703 CPLX1O14810 134 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 ST18O60284 1047 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 IFNAR1P17181 557 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 MCM2P49736 904 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 ZNF792Q3KQV3 632 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 MFSD14CQ5VZR4 134 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 MAMDC4Q6UXC1 1216 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 DNERQ8NFT8 737 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 ZSCAN31Q96LW9 406 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-234ENST00000557703 RNF26Q9BY78 433 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-234ENST00000557703 A1CFQ9NQ94 594 aaKnown RBP15.83■□□□□ 0.12
SHMT2-234ENST00000557703 FAM217BQ9NTX9 383 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-234ENST00000557703 CYP39A1Q9NYL5 469 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 NAP1L2Q9ULW6 460 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-234ENST00000557703 MYH6P13533 1939 aa15.83■□□□□ 0.12
SHMT2-234ENST00000557703 ZNFX1Q9P2E3 1918 aaKnown RBP15.83■□□□□ 0.12
SHMT2-234ENST00000557703 ASB14A6NK59 587 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 POTEB2H3BUK9 544 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 IGHA2P01877 340 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 CYP2B6P20813 491 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 AKAP17AQ02040 695 aaKnown RBP15.82■□□□□ 0.12
SHMT2-234ENST00000557703 FUT2Q10981 343 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 TRIM22Q8IYM9 498 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 CLEC4DQ8WXI8 215 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 PIGSQ96S52 555 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 KIF2CQ99661 725 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 SLKQ9H2G2 1235 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-234ENST00000557703 CPVLQ9H3G5 476 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 HOMER2Q9NSB8 354 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 LIMCH1Q9UPQ0 1083 aa15.82■□□□□ 0.12
SHMT2-234ENST00000557703 PLXNB2O15031 1838 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 PRPF3O43395 683 aaKnown RBP15.81■□□□□ 0.12
SHMT2-234ENST00000557703 PFKFB2O60825 505 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 PLEKHA8P1O95397 391 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 RXRAP19793 462 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 CDC27P30260 824 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 ADD1P35611 737 aaKnown RBP15.81■□□□□ 0.12
SHMT2-234ENST00000557703 AK2P54819 239 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 MCTP2Q6DN12 878 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 PPP1R18Q6NYC8 613 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 RNF207Q6ZRF8 634 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 CCDC144CPQ8IYA2 1237 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 FAM133AQ8N9E0 248 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 CCDC12Q8WUD4 166 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-234ENST00000557703 MAML3Q96JK9 1138 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 ZNF333Q96JL9 665 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 SYNGAP1Q96PV0 1343 aa15.81■□□□□ 0.12
SHMT2-234ENST00000557703 SH2B1Q9NRF2 756 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-234ENST00000557703 RPTORQ8N122 1335 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 CNTNAP5Q8WYK1 1306 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 COBLO75128 1261 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 SLC4A3P48751 1232 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 SNAP25P60880 206 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 NTRK3Q16288 839 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 SLC35G1Q2M3R5 365 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 USH1GQ495M9 461 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 MUM1L1Q5H9M0 696 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 BIN2Q9UBW5 565 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-234ENST00000557703 HTTP42858 3142 aa15.8■□□□□ 0.12
SHMT2-234ENST00000557703 PIK3CDO00329 1044 aa15.79■□□□□ 0.12
SHMT2-234ENST00000557703 MSCO60682 206 aa15.79■□□□□ 0.12
SHMT2-234ENST00000557703 HSD17B4P51659 736 aa15.79■□□□□ 0.12
SHMT2-234ENST00000557703 MAP3K21Q5TCX8 1036 aa15.79■□□□□ 0.12
SHMT2-234ENST00000557703 NSMFQ6X4W1 530 aa15.79■□□□□ 0.12
SHMT2-234ENST00000557703 ABHD8Q96I13 439 aa15.79■□□□□ 0.12
SHMT2-234ENST00000557703 IWS1Q96ST2 819 aa15.79■□□□□ 0.12
SHMT2-234ENST00000557703 TINF2Q9BSI4 451 aa15.79■□□□□ 0.12
SHMT2-234ENST00000557703 HMX1Q9NP08 348 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms