RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 FCER1AP12319 257 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 PSMC4P43686 418 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 HMGN5P82970 282 aaKnown RBP16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 GHRHRQ02643 423 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 PWP2Q15269 919 aaKnown RBP16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 SLC35G1Q2M3R5 365 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 CCDC174Q6PII3 467 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 GPR142Q7Z601 462 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 RAB11FIP4Q86YS3 637 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 TRERF1Q96PN7 1200 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 SH3GLB2Q9NR46 395 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 RNF146Q9NTX7 359 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 KIF3AQ9Y496 699 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
SUPT16H-208ENST00000557652 ALAS1P13196 640 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 SCG2P13521 617 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 STK3Q13188 491 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 KCTD2Q14681 263 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 PKN2Q16513 984 aaKnown RBP16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 PFKFB3Q16875 520 aaPredicted RBP16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 HOMER1Q86YM7 354 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 TRMT44Q8IYL2 757 aaKnown RBP16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 CCDC148Q8NFR7 591 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 AGBL1Q96MI9 1066 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 NUDT12Q9BQG2 462 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 PORCNQ9H237 461 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 CPVLQ9H3G5 476 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 EFCC1Q9HA90 598 aa16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 DIS3Q9Y2L1 958 aaKnown RBP16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 V9GY48 417 aaPredicted RBP16.29■□□□□ 0.2
SUPT16H-208ENST00000557652 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 HOXC6P09630 235 aa16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 XRCC5P13010 732 aaKnown RBP16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 XBP1P17861 261 aa16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 PTPREP23469 700 aa16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 IRF5Q13568 498 aa16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 GRB14Q14449 540 aa16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 MCTP2Q6DN12 878 aa16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 TMX3Q96JJ7 454 aa16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 BARHL2Q9NY43 387 aa16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.28■□□□□ 0.2
SUPT16H-208ENST00000557652 LBX1P52954 281 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 MORN1Q5T089 497 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 GALNT17Q6IS24 598 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 NOL8Q76FK4 1167 aaKnown RBP16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 HSCBQ8IWL3 235 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 CCDC82Q8N4S0 544 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 CD99L2Q8TCZ2 262 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 MMP19Q99542 508 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 LARP6Q9BRS8 491 aaKnown RBP16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 SLC26A6Q9BXS9 759 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 SRRDQ9UH36 339 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 RIPK3Q9Y572 518 aa16.27■□□□□ 0.2
SUPT16H-208ENST00000557652 B4DLN1 442 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 K7ELQ4 463 aaPredicted RBP16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 LARGE1O95461 756 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 RGS2P41220 211 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 MRPL12P52815 198 aaKnown RBP16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 MAP2K5Q13163 448 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 USH1GQ495M9 461 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 WDR78Q5VTH9 848 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 CTU1Q7Z7A3 348 aaKnown RBP16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 ZNF467Q7Z7K2 595 aaPredicted RBP16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 CMTR1Q8N1G2 835 aaKnown RBP16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 ANKRD35Q8N283 1001 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 NSUN7Q8NE18 718 aaKnown RBP16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 SMARCC2Q8TAQ2 1214 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 CLEC4DQ8WXI8 215 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 INTS4Q96HW7 963 aaKnown RBP16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 MPHOSPH6Q99547 160 aaKnown RBP16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 ZSWIM8A7E2V4 1837 aa16.26■□□□□ 0.19
SUPT16H-208ENST00000557652 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 GNA11P29992 359 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 CUL4AQ13619 759 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 PKN1Q16512 942 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 NECAB1Q8N987 351 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 BICD2Q8TD16 824 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 USP6NLQ92738 828 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 CUL5Q93034 780 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 PHKBQ93100 1093 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 APBA2Q99767 749 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 ORC3Q9UBD5 711 aaPredicted RBP16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 ADD3Q9UEY8 706 aaKnown RBP16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 TSKSQ9UJT2 592 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 GJD2Q9UKL4 321 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 LCTP09848 1927 aa16.25■□□□□ 0.19
SUPT16H-208ENST00000557652 MCM3APO60318 1980 aa16.24■□□□□ 0.19
SUPT16H-208ENST00000557652 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
SUPT16H-208ENST00000557652 PTPDC1A2A3K4 754 aa16.24■□□□□ 0.19
SUPT16H-208ENST00000557652 CD2BP2O95400 341 aaKnown RBP16.24■□□□□ 0.19
SUPT16H-208ENST00000557652 CTDNEP1O95476 244 aa16.24■□□□□ 0.19
SUPT16H-208ENST00000557652 PDIA4P13667 645 aaKnown RBP16.24■□□□□ 0.19
SUPT16H-208ENST00000557652 CALML3P27482 149 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms