RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 CDH23Q9H251 3354 aa10.76□□□□□ -0.69
NPC2-209ENST00000557510 PQBP1O60828 265 aaKnown RBP10.75□□□□□ -0.69
NPC2-209ENST00000557510 ZBED4O75132 1171 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 MX1P20591 662 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 PTGS1P23219 599 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 COPB2P35606 906 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 SNAP25P60880 206 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 TFAP4Q01664 338 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 CNTN2Q02246 1040 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 CTDSPL2Q05D32 466 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 VPS53Q5VIR6 699 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 CCSAPQ6IQ19 270 aaPredicted RBP10.75□□□□□ -0.69
NPC2-209ENST00000557510 MAMDC4Q6UXC1 1216 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 RNF180Q86T96 592 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 GMCL1P1Q8NEA9 526 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 KLHDC9Q8NEP7 349 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 DDX11Q96FC9 970 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 NAPBQ9H115 298 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 IL17RBQ9NRM6 502 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 FEM1BQ9UK73 627 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 CNPY2Q9Y2B0 182 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.75□□□□□ -0.69
NPC2-209ENST00000557510 ZNF536O15090 1300 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 SYNGAP1Q96PV0 1343 aa10.75□□□□□ -0.69
NPC2-209ENST00000557510 TMEM232C9JQI7 657 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 ERC2O15083 957 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 CLTBP09497 229 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 TSPY3P0CV98 308 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 TSPY8P0CW00 308 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 BMP3P12645 472 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 ACLYP53396 1101 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 KCNA10Q16322 511 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 FAM109BQ6ICB4 259 aaPredicted RBP10.74□□□□□ -0.69
NPC2-209ENST00000557510 ARMCX2Q7L311 632 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 MSL3Q8N5Y2 521 aaKnown RBP10.74□□□□□ -0.69
NPC2-209ENST00000557510 AGBL1Q96MI9 1066 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 CRBNQ96SW2 442 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 NACAP1Q9BZK3 213 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 KATNBL1Q9H079 304 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.74□□□□□ -0.69
NPC2-209ENST00000557510 ASTN1O14525 1302 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 UNC80Q8N2C7 3258 aa10.74□□□□□ -0.69
NPC2-209ENST00000557510 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.73□□□□□ -0.69
NPC2-209ENST00000557510 KIAA0355O15063 1070 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 CTAGE5O15320 804 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 MCCP23508 829 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 PDE4BQ07343 736 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 FAAP100Q0VG06 881 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 ACVR2BQ13705 512 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 CCDC144BQ3MJ40 725 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 KCTD1Q719H9 257 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 CCDC144CPQ8IYA2 1237 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 ANKRD35Q8N283 1001 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 FAM133AQ8N9E0 248 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 TTYH1Q9H313 450 aaPredicted RBP10.73□□□□□ -0.69
NPC2-209ENST00000557510 ZNF287Q9HBT7 754 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
NPC2-209ENST00000557510 FAM184BQ9ULE4 1060 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 ISY1Q9ULR0 285 aaKnown RBP10.73□□□□□ -0.69
NPC2-209ENST00000557510 SYNPO2Q9UMS6 1093 aa10.73□□□□□ -0.69
NPC2-209ENST00000557510 CTDP1Q9Y5B0 961 aaPredicted RBP10.73□□□□□ -0.69
NPC2-209ENST00000557510 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 DUSP11O75319 330 aaKnown RBP10.72□□□□□ -0.69
NPC2-209ENST00000557510 C6orf222P0C671 652 aaPredicted RBP10.72□□□□□ -0.69
NPC2-209ENST00000557510 SLC1A4P43007 532 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 STAT2P52630 851 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 OAZ1P54368 228 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 LRRFIP1Q32MZ4 808 aaKnown RBP10.72□□□□□ -0.69
NPC2-209ENST00000557510 TMEM63BQ5T3F8 832 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 ZNF697Q5TEC3 545 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 ANKRD45Q5TZF3 282 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 CCDC174Q6PII3 467 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 ANKRD33Q7Z3H0 272 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 CHST13Q8NET6 341 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 GMCL1Q96IK5 515 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 FAM227BQ96M60 508 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 PURBQ96QR8 312 aaKnown RBP10.72□□□□□ -0.69
NPC2-209ENST00000557510 TSEN34Q9BSV6 310 aaKnown RBP10.72□□□□□ -0.69
NPC2-209ENST00000557510 BACH2Q9BYV9 841 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 UPF3AQ9H1J1 476 aaKnown RBP10.72□□□□□ -0.69
NPC2-209ENST00000557510 STARD7Q9NQZ5 370 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 RNF146Q9NTX7 359 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 TMEM39AQ9NV64 488 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 STX8Q9UNK0 236 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 PCDHGA4Q9Y5G9 962 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 EYSQ5T1H1 3165 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 GBF1Q92538 1859 aa10.72□□□□□ -0.69
NPC2-209ENST00000557510 A0A0D9SFI3 127 aa10.71□□□□□ -0.69
NPC2-209ENST00000557510 SLC3A2P08195 630 aaKnown RBP10.71□□□□□ -0.69
NPC2-209ENST00000557510 ALAS1P13196 640 aa10.71□□□□□ -0.69
NPC2-209ENST00000557510 RAG1P15918 1043 aa10.71□□□□□ -0.69
NPC2-209ENST00000557510 CST5P28325 142 aaPredicted RBP10.71□□□□□ -0.69
NPC2-209ENST00000557510 PDE1AP54750 535 aa10.71□□□□□ -0.69
NPC2-209ENST00000557510 BEX3Q00994 111 aa10.71□□□□□ -0.69
NPC2-209ENST00000557510 MUM1L1Q5H9M0 696 aa10.71□□□□□ -0.69
NPC2-209ENST00000557510 EXOC6Q8TAG9 804 aa10.71□□□□□ -0.69
NPC2-209ENST00000557510 STAG1Q8WVM7 1258 aa10.71□□□□□ -0.69
NPC2-209ENST00000557510 CDX2Q99626 313 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms