RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 PEX26Q7Z412 305 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 NELFBQ8WX92 580 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
CHD8-213ENST00000557364 ANAPC5Q9UJX4 755 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 AMFRQ9UKV5 643 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 A2ML1A8K2U0 1454 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 CARMIL3Q8ND23 1372 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 A6NJR5 290 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 CPSF3Q9UKF6 684 aaKnown RBP9.18□□□□□ -0.94
CHD8-213ENST00000557364 RPS6KA1Q15418 735 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 CCDC186Q7Z3E2 898 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 HAUS8Q9BT25 410 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 RNF26Q9BY78 433 aaPredicted RBP9.17□□□□□ -0.94
CHD8-213ENST00000557364 SUGCTQ9HAC7 445 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.17□□□□□ -0.94
CHD8-213ENST00000557364 USP17L8P0C7I0 530 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 BCAMP50895 628 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 DOK7Q18PE1 504 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 UBLCP1Q8WVY7 318 aaPredicted RBP9.17□□□□□ -0.94
CHD8-213ENST00000557364 STMN2Q93045 179 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 PSAPP07602 524 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 CNPY4Q8N129 248 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 POMGNT1Q8WZA1 660 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 KCNH4Q9UQ05 1017 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 LAMC1P11047 1609 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 PALLDQ8WX93 1383 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 EIF3DO15371 548 aaKnown RBP eCLIP9.17□□□□□ -0.942e-6■■■□□ 17.7
CHD8-213ENST00000557364 PTK2Q05397 1052 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 DNAJC21Q5F1R6 531 aaKnown RBP9.17□□□□□ -0.94
CHD8-213ENST00000557364 LMCD1Q9NZU5 365 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 HEG1Q9ULI3 1381 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 S100BP04271 92 aaPredicted RBP9.17□□□□□ -0.94
CHD8-213ENST00000557364 HSPA1LP34931 641 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 ARMCX5Q6P1M9 558 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 NUDT18Q6ZVK8 323 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 RSRC2Q7L4I2 434 aaKnown RBP9.17□□□□□ -0.94
CHD8-213ENST00000557364 G2E3Q7L622 706 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 PPP4R1Q8TF05 950 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 IFT81Q8WYA0 676 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 CLSTN2Q9H4D0 955 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 PANK4Q9NVE7 773 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 WDR64B1ANS9 1081 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 EBAG9O00559 213 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 ARHGAP6O43182 974 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 XRCC6P12956 609 aaKnown RBP eCLIP9.17□□□□□ -0.94
CHD8-213ENST00000557364 PPFIA1Q13136 1202 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 SLFN12LQ6IEE8 588 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 CCDC62Q6P9F0 684 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 B4GALNT4Q76KP1 1039 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 ST7Q9NRC1 585 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 SPATA31A6Q5VVP1 1343 aa9.17□□□□□ -0.94
CHD8-213ENST00000557364 HSPA8P11142 646 aaKnown RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 GYG1P46976 350 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 SCNN1DP51172 638 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 TTC39CQ8N584 583 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 ANO3Q9BYT9 981 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 BSDC1Q9NW68 430 aaPredicted RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 SUGT1Q9Y2Z0 365 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 JCADQ9P266 1359 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 TNKSO95271 1327 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 GARSP41250 739 aaKnown RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 UAP1Q16222 522 aaPredicted RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 MAEAQ7L5Y9 396 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 ERBB3P21860 1342 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 MAP3K7O43318 606 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 IRX4P78413 519 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 PAK2Q13177 524 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 TMEM179Q6ZVK1 233 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 PODNQ7Z5L7 613 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 CDKL2Q92772 493 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 ZNF577Q9BSK1 485 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 TMX1Q9H3N1 280 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 JAK3P52333 1124 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 MFSD14CQ5VZR4 134 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 FAM76AQ8TAV0 307 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 ZNF341Q9BYN7 854 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 RIPOR2Q9Y4F9 1068 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 SNX14Q9Y5W7 946 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 RPS6KA4O75676 772 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 PIK3CAP42336 1068 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 KPNA2P52292 529 aaKnown RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 MFAP3P55082 362 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 POLA2Q14181 598 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 FASTKD5Q7L8L6 764 aaKnown RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 TRIM58Q8NG06 486 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 ZC3H15Q8WU90 426 aaKnown RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 CALR3Q96L12 384 aaKnown RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 ZSWIM4Q9H7M6 989 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 FMNL1O95466 1100 aaPredicted RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 NOLC1Q14978 699 aaKnown RBP eCLIP9.16□□□□□ -0.942e-52■■■■■ 60.4
CHD8-213ENST00000557364 ADALQ6DHV7 355 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 SDCCAG8Q86SQ7 713 aaPredicted RBP9.16□□□□□ -0.94
CHD8-213ENST00000557364 LZTFL1Q9NQ48 299 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 ABCC4O15439 1325 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 IGSF1Q8N6C5 1336 aa9.16□□□□□ -0.94
CHD8-213ENST00000557364 ERICH4A6NGS2 130 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 M0R2C6 588 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 HNRNPDLO14979 420 aaKnown RBP9.15□□□□□ -0.94
CHD8-213ENST00000557364 MAGEA1P43355 309 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms