RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 USP5P45974 858 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 AFF1P51825 1210 aaKnown RBP6.2□□□□□ -1.42
ATXN3-247ENST00000557311 GTF2A2P52657 109 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 COL9A3Q14050 684 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-247ENST00000557311 KIF22Q14807 665 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 TAF1CQ15572 869 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-247ENST00000557311 NBPF12Q5TAG4 269 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-247ENST00000557311 PDE12Q6L8Q7 609 aaKnown RBP6.2□□□□□ -1.42
ATXN3-247ENST00000557311 C20orf204Q6ZNR8 217 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 TXNRD3Q86VQ6 643 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 JARID2Q92833 1246 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-247ENST00000557311 MYD88Q99836 296 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 LPIN3Q9BQK8 851 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 ANKRD2Q9GZV1 360 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 PRO3102Q9H379 93 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 LAS1LQ9Y4W2 734 aaKnown RBP6.2□□□□□ -1.42
ATXN3-247ENST00000557311 ZNF804BA4D1E1 1349 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 CCL15-CCL14A0A0B4J2E2 113 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 ICMTO60725 284 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 PHACTR2O75167 634 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 SMNDC1O75940 238 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATXN3-247ENST00000557311 CYP2E1P05181 493 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-247ENST00000557311 CDC25BP30305 580 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 DEKP35659 375 aaKnown RBP6.19□□□□□ -1.42
ATXN3-247ENST00000557311 SOX18P35713 384 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 IGHMBP2P38935 993 aaKnown RBP6.19□□□□□ -1.42
ATXN3-247ENST00000557311 GATA4P43694 442 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 RBM10P98175 930 aaKnown RBP6.19□□□□□ -1.42
ATXN3-247ENST00000557311 EHHADHQ08426 723 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 RASA3Q14644 834 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 CCL15Q16663 113 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 RSPO4Q2I0M5 234 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-247ENST00000557311 DUSP27Q5VZP5 1158 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 CEP135Q66GS9 1140 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 OR13H1Q8NG92 308 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 TTLL11Q8NHH1 800 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 SH3TC2Q8TF17 1288 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 BRI3BPQ8WY22 251 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 OPTNQ96CV9 577 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 PRMT6Q96LA8 375 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-247ENST00000557311 NAP1L5Q96NT1 182 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-247ENST00000557311 METTL22Q9BUU2 404 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-247ENST00000557311 LACRTQ9GZZ8 138 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 CD209Q9NNX6 404 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 PRDM6Q9NQX0 595 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 FRRS1LQ9P0K9 344 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 EGFL7Q9UHF1 273 aa6.19□□□□□ -1.42
ATXN3-247ENST00000557311 COL1A1P02452 1464 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-247ENST00000557311 CLRN2A0PK11 232 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 NDUFB5O43674 189 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 TLR2O60603 784 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 DDX58O95786 925 aaKnown RBP6.18□□□□□ -1.42
ATXN3-247ENST00000557311 GJB1P08034 283 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 NID1P14543 1247 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 CAPN2P17655 700 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 HOXD10P28358 340 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 KCNJ4P48050 445 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 CTSWP56202 376 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 FKBP1AP62942 108 aaKnown RBP6.18□□□□□ -1.42
ATXN3-247ENST00000557311 LACTBP83111 547 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-247ENST00000557311 TNFAIP1Q13829 316 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 GRIK4Q16099 956 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 CFAP100Q494V2 611 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-247ENST00000557311 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 IL22RA1Q8N6P7 574 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 NACC1Q96RE7 527 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 GREM2Q9H772 168 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 PHAXQ9H814 394 aaKnown RBP6.18□□□□□ -1.42
ATXN3-247ENST00000557311 VEZTQ9HBM0 779 aa6.18□□□□□ -1.42
ATXN3-247ENST00000557311 ZCCHC17Q9NP64 241 aaKnown RBP6.18□□□□□ -1.42
ATXN3-247ENST00000557311 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
ATXN3-247ENST00000557311 LAMB4A4D0S4 1761 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 ANKRD36CQ5JPF3 1778 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 A0A0A0MRY4 1105 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 F8W031 263 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-247ENST00000557311 BRD1O95696 1058 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 HMGB1P09429 215 aaKnown RBP6.17□□□□□ -1.42
ATXN3-247ENST00000557311 CETPP11597 493 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 GJA8P48165 433 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 RBM5P52756 815 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-247ENST00000557311 ATP11AP98196 1134 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 NKAPLQ5M9Q1 402 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 ZMYM1Q5SVZ6 1142 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 CERS5Q8N5B7 392 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 C1orf127Q8N9H9 656 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 PMEPA1Q969W9 287 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 CNTN3Q9P232 1028 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 BCCIPQ9P287 314 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-247ENST00000557311 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 TRIM33Q9UPN9 1127 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 PCDHAC2Q9Y5I4 1007 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 CSADQ9Y600 493 aa6.17□□□□□ -1.42
ATXN3-247ENST00000557311 KIAA0100Q14667 2235 aaKnown RBP6.17□□□□□ -1.42
ATXN3-247ENST00000557311 LRRC37AA6NMS7 1700 aa6.16□□□□□ -1.42
ATXN3-247ENST00000557311 FZD6O60353 706 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms