RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TRPV1Q8NER1 839 aa10.44□□□□□ -0.74
VRK1-206ENST00000557222 TSC1Q92574 1164 aa10.44□□□□□ -0.74
VRK1-206ENST00000557222 TANGO6Q9C0B7 1094 aa10.44□□□□□ -0.74
VRK1-206ENST00000557222 FRMPD3Q5JV73 1810 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 KBTBD13C9JR72 458 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 GOLIM4O00461 696 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 WDR46O15213 610 aaKnown RBP10.43□□□□□ -0.74
VRK1-206ENST00000557222 SIAH2O43255 324 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 FCER1AP12319 257 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 COPB2P35606 906 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 RTP1P59025 263 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 HNRNPUQ00839 825 aaKnown RBP eCLIP10.43□□□□□ -0.74
VRK1-206ENST00000557222 SNX17Q15036 470 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 CTC1Q2NKJ3 1217 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 SLC39A5Q6ZMH5 540 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 Q7L0L9 218 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 SIAH1Q8IUQ4 282 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 AMOTL1Q8IY63 956 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 DDRGK1Q96HY6 314 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.43□□□□□ -0.74
VRK1-206ENST00000557222 VCPKMTQ9H867 229 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 IL1RAPL2Q9NP60 686 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 MAP10Q9P2G4 905 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 ADAMTS5Q9UNA0 930 aa10.43□□□□□ -0.74
VRK1-206ENST00000557222 DIS3Q9Y2L1 958 aaKnown RBP10.43□□□□□ -0.74
VRK1-206ENST00000557222 AXIN1O15169 862 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 COBLO75128 1261 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 FLOT1O75955 427 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 ATP5JP18859 108 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 ADD2P35612 726 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 SMCPP49901 116 aaPredicted RBP10.42□□□□□ -0.74
VRK1-206ENST00000557222 ICA1Q05084 483 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 UBE3CQ15386 1083 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 SKIV2LQ15477 1246 aaKnown RBP10.42□□□□□ -0.74
VRK1-206ENST00000557222 C12orf60Q5U649 245 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 LCORLQ8N3X6 602 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 ZNF511Q8NB15 262 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 SDR42E1Q8WUS8 393 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 MAML3Q96JK9 1138 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 KANSL2Q9H9L4 492 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 PAG1Q9NWQ8 432 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 DDX19BQ9UMR2 479 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 RLFQ13129 1914 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
VRK1-206ENST00000557222 CDK8P49336 464 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 KIAA1755Q5JYT7 1200 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 GJC2Q5T442 439 aaPredicted RBP10.41□□□□□ -0.74
VRK1-206ENST00000557222 ZSCAN25Q6NSZ9 544 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 NCAPG2Q86XI2 1143 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 RIOX2Q8IUF8 465 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 MSL3Q8N5Y2 521 aaKnown RBP10.41□□□□□ -0.74
VRK1-206ENST00000557222 PANK1Q8TE04 598 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 DNAJC2Q99543 621 aaKnown RBP10.41□□□□□ -0.74
VRK1-206ENST00000557222 HAUS7Q99871 368 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 ARMT1Q9H993 441 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 ZBTB40Q9NUA8 1239 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 DACH1Q9UI36 760 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 A0A0G2JMZ2 1700 aa10.41□□□□□ -0.74
VRK1-206ENST00000557222 ROBO3Q96MS0 1386 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 ZBED9Q6R2W3 1325 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 MBD4O95243 580 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 CYP2D6P10635 497 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 AKR1B1P15121 316 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 PLS1Q14651 629 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 TMEM132BQ14DG7 1078 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 LRRC41Q15345 812 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 SLC44A5Q8NCS7 719 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 HPS1Q92902 700 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 ATG4CQ96DT6 458 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 DYNLL2Q96FJ2 89 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 GOPCQ9HD26 462 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 ATP11BQ9Y2G3 1177 aa10.4□□□□□ -0.74
VRK1-206ENST00000557222 TTC28Q96AY4 2481 aa10.4□□□□□ -0.75
VRK1-206ENST00000557222 ZNFX1Q9P2E3 1918 aaKnown RBP10.39□□□□□ -0.75
VRK1-206ENST00000557222 USP17L12C9JPN9 530 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 USP17L21D6R901 530 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 VWA5AO00534 786 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 PRKAB2O43741 272 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 RARBP10826 455 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 STAT3P40763 770 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 SMAD3P84022 425 aaKnown RBP10.39□□□□□ -0.75
VRK1-206ENST00000557222 KCTD2Q14681 263 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 ZNF792Q3KQV3 632 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 GIMAP6Q6P9H5 292 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 RNF180Q86T96 592 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 SIRT2Q8IXJ6 389 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 GUCD1Q96NT3 240 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 MMP19Q99542 508 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 TINF2Q9BSI4 451 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 TSEN34Q9BSV6 310 aaKnown RBP10.39□□□□□ -0.75
VRK1-206ENST00000557222 BOLA2Q9H3K6 86 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 PPP1R9AQ9ULJ8 1098 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 PHF24Q9UPV7 400 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 TACC3Q9Y6A5 838 aa10.39□□□□□ -0.75
VRK1-206ENST00000557222 SMCHD1A6NHR9 2005 aa10.38□□□□□ -0.75
VRK1-206ENST00000557222 PRUNE2Q8WUY3 3088 aa10.38□□□□□ -0.75
VRK1-206ENST00000557222 TMEM265A0A087WTH1 108 aa10.38□□□□□ -0.75
VRK1-206ENST00000557222 EEF2P13639 858 aaKnown RBP10.38□□□□□ -0.75
VRK1-206ENST00000557222 ADCYAP1R1P41586 468 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms