RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 LAMA4Q16363 1823 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 ZNFX1Q9P2E3 1918 aaKnown RBP13.92□□□□□ -0.18
SYNE2-226ENST00000557084 TRIOBPQ9H2D6 2365 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 CDC45O75419 566 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 SNAI1O95863 264 aaPredicted RBP13.92□□□□□ -0.18
SYNE2-226ENST00000557084 CENPBP07199 599 aaPredicted RBP13.92□□□□□ -0.18
SYNE2-226ENST00000557084 ZNF865P0CJ78 1059 aaPredicted RBP13.92□□□□□ -0.18
SYNE2-226ENST00000557084 ACVR2BQ13705 512 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 WTAPQ15007 396 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 USH1GQ495M9 461 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 TMEM67Q5HYA8 995 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 CCDC144CPQ8IYA2 1237 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 FAM133AQ8N9E0 248 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 CPVLQ9H3G5 476 aa13.92□□□□□ -0.18
SYNE2-226ENST00000557084 ADD3Q9UEY8 706 aaKnown RBP13.92□□□□□ -0.18
SYNE2-226ENST00000557084 WDR19Q8NEZ3 1342 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 PGK1P00558 417 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 COL6A1P12109 1028 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
SYNE2-226ENST00000557084 BAATQ14032 418 aaPredicted RBP13.91□□□□□ -0.18
SYNE2-226ENST00000557084 LRRC41Q15345 812 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 CDC37Q16543 378 aaPredicted RBP13.91□□□□□ -0.18
SYNE2-226ENST00000557084 RNF20Q5VTR2 975 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 CHST3Q7LGC8 479 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 CATIPQ7Z7H3 387 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 MPHOSPH6Q99547 160 aaKnown RBP13.91□□□□□ -0.18
SYNE2-226ENST00000557084 LSG1Q9H089 658 aaKnown RBP13.91□□□□□ -0.18
SYNE2-226ENST00000557084 SPC25Q9HBM1 224 aa13.91□□□□□ -0.18
SYNE2-226ENST00000557084 KLRF2D3W0D1 207 aa13.9□□□□□ -0.18
SYNE2-226ENST00000557084 NFIBO00712 420 aa13.9□□□□□ -0.18
SYNE2-226ENST00000557084 CALML3P27482 149 aa13.9□□□□□ -0.18
SYNE2-226ENST00000557084 SEC23AQ15436 765 aa13.9□□□□□ -0.18
SYNE2-226ENST00000557084 CCDC144BQ3MJ40 725 aa13.9□□□□□ -0.18
SYNE2-226ENST00000557084 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
SYNE2-226ENST00000557084 RNF207Q6ZRF8 634 aa13.9□□□□□ -0.18
SYNE2-226ENST00000557084 FERMT2Q96AC1 680 aa13.9□□□□□ -0.18
SYNE2-226ENST00000557084 ZMYND8Q9ULU4 1186 aaPredicted RBP13.9□□□□□ -0.18
SYNE2-226ENST00000557084 COLQQ9Y215 455 aaPredicted RBP13.9□□□□□ -0.18
SYNE2-226ENST00000557084 TAF6LQ9Y6J9 622 aa13.9□□□□□ -0.18
SYNE2-226ENST00000557084 SOWAHBA6NEL2 793 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 B4DLN1 442 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 SLC27A2O14975 620 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 DUSP11O75319 330 aaKnown RBP13.89□□□□□ -0.19
SYNE2-226ENST00000557084 MCM5P33992 734 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 ADCYAP1R1P41586 468 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 MRPL12P52815 198 aaKnown RBP13.89□□□□□ -0.19
SYNE2-226ENST00000557084 LRRC26Q2I0M4 334 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 CREB3L3Q68CJ9 461 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 STOX1Q6ZVD7 989 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 FBXO11Q86XK2 927 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 LENG1Q96BZ8 264 aaPredicted RBP13.89□□□□□ -0.19
SYNE2-226ENST00000557084 FGD4Q96M96 766 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 PRKAG2Q9UGJ0 569 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 PLXNA1Q9UIW2 1896 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 ABCB11O95342 1321 aa13.89□□□□□ -0.19
SYNE2-226ENST00000557084 PRC1O43663 620 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 C6orf222P0C671 652 aaPredicted RBP13.88□□□□□ -0.19
SYNE2-226ENST00000557084 SYN1P17600 705 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 RPS6P62753 249 aaKnown RBP13.88□□□□□ -0.19
SYNE2-226ENST00000557084 TNFAIP2Q03169 654 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 QRICH1Q2TAL8 776 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 HABP4Q5JVS0 413 aaKnown RBP13.88□□□□□ -0.19
SYNE2-226ENST00000557084 EEPD1Q7L9B9 569 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 MCF2L2Q86YR7 1114 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 MB21D2Q8IYB1 491 aaPredicted RBP13.88□□□□□ -0.19
SYNE2-226ENST00000557084 TMTC2Q8N394 836 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 NUP133Q8WUM0 1156 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 CLEC4DQ8WXI8 215 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 VTI1AQ96AJ9 217 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 JMJD4Q9H9V9 463 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 ATP11BQ9Y2G3 1177 aa13.88□□□□□ -0.19
SYNE2-226ENST00000557084 MRPL11Q9Y3B7 192 aaKnown RBP13.88□□□□□ -0.19
SYNE2-226ENST00000557084 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 PDE4DQ08499 809 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 TRAF1Q13077 416 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 GRM4Q14833 912 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 GNASQ5JWF2 1037 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 SLC30A10Q6XR72 485 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 STAG2Q8N3U4 1231 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 CTCFLQ8NI51 663 aaPredicted RBP13.87□□□□□ -0.19
SYNE2-226ENST00000557084 PURBQ96QR8 312 aaKnown RBP13.87□□□□□ -0.19
SYNE2-226ENST00000557084 AMNQ9BXJ7 453 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 AP5M1Q9H0R1 490 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 VTA1Q9NP79 307 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 MAD2L2Q9UI95 211 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 SYNRGQ9UMZ2 1314 aa13.87□□□□□ -0.19
SYNE2-226ENST00000557084 SMCHD1A6NHR9 2005 aa13.86□□□□□ -0.19
SYNE2-226ENST00000557084 LOC102724159A0A0B4J2E5 919 aa13.86□□□□□ -0.19
SYNE2-226ENST00000557084 PALM3A6NDB9 673 aaPredicted RBP13.86□□□□□ -0.19
SYNE2-226ENST00000557084 KIF5BP33176 963 aa13.86□□□□□ -0.19
SYNE2-226ENST00000557084 ALDH5A1P51649 535 aaPredicted RBP13.86□□□□□ -0.19
SYNE2-226ENST00000557084 ANTXR2P58335 489 aa13.86□□□□□ -0.19
SYNE2-226ENST00000557084 RTP1P59025 263 aa13.86□□□□□ -0.19
SYNE2-226ENST00000557084 NECTIN1Q15223 517 aa13.86□□□□□ -0.19
SYNE2-226ENST00000557084 PWP2Q15269 919 aaKnown RBP13.86□□□□□ -0.19
SYNE2-226ENST00000557084 IQSEC1Q6DN90 963 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms