RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 SH3D21A4FU49 640 aa5.7□□□□□ -1.5
LINC00871-203ENST00000556869 F8W031 263 aaPredicted RBP5.7□□□□□ -1.5
LINC00871-203ENST00000556869 GREM1O60565 184 aa5.7□□□□□ -1.5
LINC00871-203ENST00000556869 EIF4A3P38919 411 aaKnown RBP5.7□□□□□ -1.5
LINC00871-203ENST00000556869 PRR5P85299 388 aa5.7□□□□□ -1.5
LINC00871-203ENST00000556869 ZXDAP98168 799 aa5.7□□□□□ -1.5
LINC00871-203ENST00000556869 CLCQ05315 142 aa5.7□□□□□ -1.5
LINC00871-203ENST00000556869 SEZ6Q53EL9 994 aa5.7□□□□□ -1.5
LINC00871-203ENST00000556869 ERMP1Q7Z2K6 904 aa5.7□□□□□ -1.5
LINC00871-203ENST00000556869 KCNQ5Q9NR82 932 aa5.7□□□□□ -1.5
LINC00871-203ENST00000556869 SMPD4Q9NXE4 827 aa5.7□□□□□ -1.5
LINC00871-203ENST00000556869 H0Y8X5 98 aa5.69□□□□□ -1.5
LINC00871-203ENST00000556869 GJA9P57773 515 aa5.69□□□□□ -1.5
LINC00871-203ENST00000556869 DLX2Q07687 328 aaPredicted RBP5.69□□□□□ -1.5
LINC00871-203ENST00000556869 CWF19L1Q69YN2 538 aaKnown RBP5.69□□□□□ -1.5
LINC00871-203ENST00000556869 SLC9A7Q96T83 725 aa5.69□□□□□ -1.5
LINC00871-203ENST00000556869 RNF38Q9H0F5 515 aa5.69□□□□□ -1.5
LINC00871-203ENST00000556869 PDLIM7Q9NR12 457 aa5.69□□□□□ -1.5
LINC00871-203ENST00000556869 PRR13Q9NZ81 148 aa5.69□□□□□ -1.5
LINC00871-203ENST00000556869 UBP1Q9NZI7 540 aa5.69□□□□□ -1.5
LINC00871-203ENST00000556869 C9IYK1 514 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 TNFRSF10CO14798 259 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 MATN3O15232 486 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 SHOXO15266 292 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 NOBOXO60393 691 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 ASGR2P07307 311 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 MCM4P33991 863 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 TAGLNQ01995 201 aaKnown RBP5.68□□□□□ -1.5
LINC00871-203ENST00000556869 FBXO33Q7Z6M2 555 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 C7orf61Q8IZ16 206 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 CARFQ8N187 725 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 ZNF296Q8WUU4 475 aaPredicted RBP5.68□□□□□ -1.5
LINC00871-203ENST00000556869 ALG3Q92685 438 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 BCAS3Q9H6U6 928 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 RXFP1Q9HBX9 757 aa5.68□□□□□ -1.5
LINC00871-203ENST00000556869 FGF10O15520 208 aaPredicted RBP5.67□□□□□ -1.5
LINC00871-203ENST00000556869 ITGB3P05106 788 aa5.67□□□□□ -1.5
LINC00871-203ENST00000556869 NCAM1P13591 858 aa5.67□□□□□ -1.5
LINC00871-203ENST00000556869 TDRD10Q5VZ19 366 aaKnown RBP5.67□□□□□ -1.5
LINC00871-203ENST00000556869 CYP2R1Q6VVX0 501 aa5.67□□□□□ -1.5
LINC00871-203ENST00000556869 SND1Q7KZF4 910 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC00871-203ENST00000556869 CCDC144CPQ8IYA2 1237 aa5.67□□□□□ -1.5
LINC00871-203ENST00000556869 LNPKQ9C0E8 428 aa5.67□□□□□ -1.5
LINC00871-203ENST00000556869 SUCOQ9UBS9 1254 aaKnown RBP5.67□□□□□ -1.5
LINC00871-203ENST00000556869 MEIS3P2A8K0S8 358 aa5.66□□□□□ -1.5
LINC00871-203ENST00000556869 SUV39H1O43463 412 aa5.66□□□□□ -1.5
LINC00871-203ENST00000556869 APOBRQ0VD83 1088 aa5.66□□□□□ -1.5
LINC00871-203ENST00000556869 B3GNT8Q7Z7M8 397 aa5.66□□□□□ -1.5
LINC00871-203ENST00000556869 USP48Q86UV5 1035 aa5.66□□□□□ -1.5
LINC00871-203ENST00000556869 BRF1Q92994 677 aa5.66□□□□□ -1.5
LINC00871-203ENST00000556869 PMLP29590 882 aa5.65□□□□□ -1.5
LINC00871-203ENST00000556869 LRRFIP1Q32MZ4 808 aaKnown RBP5.65□□□□□ -1.5
LINC00871-203ENST00000556869 DCAF15Q66K64 600 aa5.65□□□□□ -1.5
LINC00871-203ENST00000556869 DNAJC14Q6Y2X3 702 aaPredicted RBP5.65□□□□□ -1.5
LINC00871-203ENST00000556869 REXO1Q8N1G1 1221 aaKnown RBP5.65□□□□□ -1.5
LINC00871-203ENST00000556869 SLC16A11Q8NCK7 471 aa5.65□□□□□ -1.5
LINC00871-203ENST00000556869 NOX5Q96PH1 765 aa5.65□□□□□ -1.5
LINC00871-203ENST00000556869 RBM15Q96T37 977 aaKnown RBP eCLIP5.65□□□□□ -1.5
LINC00871-203ENST00000556869 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.5
LINC00871-203ENST00000556869 SRRDQ9UH36 339 aa5.65□□□□□ -1.5
LINC00871-203ENST00000556869 ADAMTS1Q9UHI8 967 aa5.65□□□□□ -1.5
LINC00871-203ENST00000556869 PATL2C9JE40 543 aaKnown RBP5.64□□□□□ -1.51
LINC00871-203ENST00000556869 FSHBP01225 129 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 ACRP10323 421 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 IFNGR1P15260 489 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 ZNF165P49910 485 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 CORO7P57737 925 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 ZNF445P59923 1031 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 NOL9Q5SY16 702 aaKnown RBP5.64□□□□□ -1.51
LINC00871-203ENST00000556869 SMARCC2Q8TAQ2 1214 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 LOXL4Q96JB6 756 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 C8orf49Q96NF6 230 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 PTCHD1Q96NR3 888 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 SRRTQ9BXP5 876 aaKnown RBP5.64□□□□□ -1.51
LINC00871-203ENST00000556869 FAM86C1Q9NVL1 165 aa5.64□□□□□ -1.51
LINC00871-203ENST00000556869 CD3EP07766 207 aa5.63□□□□□ -1.51
LINC00871-203ENST00000556869 L1CAMP32004 1257 aa5.63□□□□□ -1.51
LINC00871-203ENST00000556869 SARSP49591 514 aaKnown RBP5.63□□□□□ -1.51
LINC00871-203ENST00000556869 CPZQ66K79 652 aa5.63□□□□□ -1.51
LINC00871-203ENST00000556869 PPFIBP1Q86W92 1011 aa5.63□□□□□ -1.51
LINC00871-203ENST00000556869 ZNF761Q86XN6 746 aaPredicted RBP5.63□□□□□ -1.51
LINC00871-203ENST00000556869 FIBCD1Q8N539 461 aa5.63□□□□□ -1.51
LINC00871-203ENST00000556869 DHRS1Q96LJ7 313 aa5.63□□□□□ -1.51
LINC00871-203ENST00000556869 FCRL3Q96P31 734 aaPredicted RBP5.63□□□□□ -1.51
LINC00871-203ENST00000556869 SPATA6Q9NWH7 488 aaPredicted RBP5.63□□□□□ -1.51
LINC00871-203ENST00000556869 NTMQ9P121 344 aa5.63□□□□□ -1.51
LINC00871-203ENST00000556869 GLI4P10075 376 aa5.62□□□□□ -1.51
LINC00871-203ENST00000556869 ZNF20P17024 532 aa5.62□□□□□ -1.51
LINC00871-203ENST00000556869 NOP2P46087 812 aaKnown RBP5.62□□□□□ -1.51
LINC00871-203ENST00000556869 PMS1P54277 932 aaKnown RBP5.62□□□□□ -1.51
LINC00871-203ENST00000556869 SMAD4Q13485 552 aaKnown RBP5.62□□□□□ -1.51
LINC00871-203ENST00000556869 AXDND1Q5T1B0 1012 aaPredicted RBP5.62□□□□□ -1.51
LINC00871-203ENST00000556869 ZBTB8AQ96BR9 441 aa5.62□□□□□ -1.51
LINC00871-203ENST00000556869 ZDHHC15Q96MV8 337 aa5.62□□□□□ -1.51
LINC00871-203ENST00000556869 NOL6Q9H6R4 1146 aaKnown RBP5.62□□□□□ -1.51
LINC00871-203ENST00000556869 GP6Q9HCN6 339 aa5.62□□□□□ -1.51
LINC00871-203ENST00000556869 FBLN5Q9UBX5 448 aa5.62□□□□□ -1.51
LINC00871-203ENST00000556869 GGT7Q9UJ14 662 aa5.62□□□□□ -1.51
LINC00871-203ENST00000556869 TBC1D8O95759 1140 aa5.61□□□□□ -1.51
LINC00871-203ENST00000556869 TP53P04637 393 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms