RNA–Protein interactions for RNA: ENST00000556863.1

CIPC-207, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3

Gene CIPC, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-207ENST00000556863 TRIM22Q8IYM9 498 aa16.52■□□□□ 0.24
CIPC-207ENST00000556863 SMARCC2Q8TAQ2 1214 aa16.52■□□□□ 0.24
CIPC-207ENST00000556863 SHISA4Q96DD7 197 aa16.52■□□□□ 0.24
CIPC-207ENST00000556863 TRERF1Q96PN7 1200 aa16.52■□□□□ 0.24
CIPC-207ENST00000556863 RNF146Q9NTX7 359 aa16.52■□□□□ 0.24
CIPC-207ENST00000556863 ORC3Q9UBD5 711 aaPredicted RBP16.52■□□□□ 0.24
CIPC-207ENST00000556863 PCDHA1Q9Y5I3 950 aa16.52■□□□□ 0.24
CIPC-207ENST00000556863 STXBP3O00186 592 aa16.51■□□□□ 0.23
CIPC-207ENST00000556863 NFIBO00712 420 aa16.51■□□□□ 0.23
CIPC-207ENST00000556863 DEXIO95424 95 aa16.51■□□□□ 0.23
CIPC-207ENST00000556863 CCNA1P78396 465 aa16.51■□□□□ 0.23
CIPC-207ENST00000556863 SP3Q02447 781 aa16.51■□□□□ 0.23
CIPC-207ENST00000556863 CD99L2Q8TCZ2 262 aa16.51■□□□□ 0.23
CIPC-207ENST00000556863 ZNF296Q8WUU4 475 aaPredicted RBP16.51■□□□□ 0.23
CIPC-207ENST00000556863 LLPHQ9BRT6 129 aaKnown RBP16.51■□□□□ 0.23
CIPC-207ENST00000556863 ZNFX1Q9P2E3 1918 aaKnown RBP16.51■□□□□ 0.23
CIPC-207ENST00000556863 PCNTO95613 3336 aa16.5■□□□□ 0.23
CIPC-207ENST00000556863 ABCB11O95342 1321 aa16.5■□□□□ 0.23
CIPC-207ENST00000556863 OPLAHO14841 1288 aa16.5■□□□□ 0.23
CIPC-207ENST00000556863 SLC25A27O95847 323 aa16.5■□□□□ 0.23
CIPC-207ENST00000556863 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
CIPC-207ENST00000556863 SPRYD3Q8NCJ5 442 aa16.5■□□□□ 0.23
CIPC-207ENST00000556863 SHCBP1Q8NEM2 672 aa16.5■□□□□ 0.23
CIPC-207ENST00000556863 CLEC4DQ8WXI8 215 aa16.5■□□□□ 0.23
CIPC-207ENST00000556863 GJB4Q9NTQ9 266 aa16.5■□□□□ 0.23
CIPC-207ENST00000556863 VPS54Q9P1Q0 977 aa16.5■□□□□ 0.23
CIPC-207ENST00000556863 ZNF236Q9UL36 1845 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 FKTNO75072 461 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 HSPA8P11142 646 aaKnown RBP16.49■□□□□ 0.23
CIPC-207ENST00000556863 NAPAP54920 295 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 TKFCQ3LXA3 575 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 GPR142Q7Z601 462 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 CCAR1Q8IX12 1150 aaKnown RBP16.49■□□□□ 0.23
CIPC-207ENST00000556863 DOCK3Q8IZD9 2030 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 TBC1D5Q92609 795 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 ALG1Q9BT22 464 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 MROH8Q9H579 483 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 ACAD9Q9H845 621 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 CWC22Q9HCG8 908 aaKnown RBP16.49■□□□□ 0.23
CIPC-207ENST00000556863 BARHL2Q9NY43 387 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 RBM27Q9P2N5 1060 aaKnown RBP16.49■□□□□ 0.23
CIPC-207ENST00000556863 PLXNA1Q9UIW2 1896 aa16.49■□□□□ 0.23
CIPC-207ENST00000556863 CASP8AP2Q9UKL3 1982 aa16.48■□□□□ 0.23
CIPC-207ENST00000556863 ADAMTS3O15072 1205 aa16.48■□□□□ 0.23
CIPC-207ENST00000556863 GJB2P29033 226 aa16.48■□□□□ 0.23
CIPC-207ENST00000556863 MAPK4P31152 587 aa16.48■□□□□ 0.23
CIPC-207ENST00000556863 COPB2P35606 906 aa16.48■□□□□ 0.23
CIPC-207ENST00000556863 PSMC4P43686 418 aa16.48■□□□□ 0.23
CIPC-207ENST00000556863 NSMFQ6X4W1 530 aa16.48■□□□□ 0.23
CIPC-207ENST00000556863 CHST13Q8NET6 341 aa16.48■□□□□ 0.23
CIPC-207ENST00000556863 SMC3Q9UQE7 1217 aa16.48■□□□□ 0.23
CIPC-207ENST00000556863 MRPL11Q9Y3B7 192 aaKnown RBP16.48■□□□□ 0.23
CIPC-207ENST00000556863 RBM19Q9Y4C8 960 aaKnown RBP16.48■□□□□ 0.23
CIPC-207ENST00000556863 hCG_1984214I3L0E3 225 aa16.47■□□□□ 0.23
CIPC-207ENST00000556863 HMGN5P82970 282 aaKnown RBP16.47■□□□□ 0.23
CIPC-207ENST00000556863 NOM1Q5C9Z4 860 aaKnown RBP16.47■□□□□ 0.23
CIPC-207ENST00000556863 SLC30A10Q6XR72 485 aa16.47■□□□□ 0.23
CIPC-207ENST00000556863 PLEKHH3Q7Z736 793 aa16.47■□□□□ 0.23
CIPC-207ENST00000556863 ZNF713Q8N859 430 aaPredicted RBP16.47■□□□□ 0.23
CIPC-207ENST00000556863 MMP19Q99542 508 aa16.47■□□□□ 0.23
CIPC-207ENST00000556863 A1CFQ9NQ94 594 aaKnown RBP16.47■□□□□ 0.23
CIPC-207ENST00000556863 PNMA2Q9UL42 364 aa16.47■□□□□ 0.23
CIPC-207ENST00000556863 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
CIPC-207ENST00000556863 TNPO2O14787 897 aaKnown RBP16.46■□□□□ 0.23
CIPC-207ENST00000556863 PTPREP23469 700 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 FCGRTP55899 365 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 BECN1Q14457 450 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 KIF22Q14807 665 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 UBE2SQ16763 222 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 PPP1R18Q6NYC8 613 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 FAM184AQ8NB25 1140 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 ERO1AQ96HE7 468 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 PURBQ96QR8 312 aaKnown RBP16.46■□□□□ 0.23
CIPC-207ENST00000556863 FBXO40Q9UH90 709 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 KCNJ14Q9UNX9 436 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 IVNS1ABPQ9Y6Y0 642 aa16.46■□□□□ 0.23
CIPC-207ENST00000556863 SMCO2A6NFE2 343 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 CFBP00751 764 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 PGK2P07205 417 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 FCER1AP12319 257 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 HOXA13P31271 388 aaPredicted RBP16.45■□□□□ 0.22
CIPC-207ENST00000556863 ANP32AP39687 249 aaKnown RBP16.45■□□□□ 0.22
CIPC-207ENST00000556863 LBX1P52954 281 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 GUCY1B3Q02153 619 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 TRAF1Q13077 416 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 BAATQ14032 418 aaPredicted RBP16.45■□□□□ 0.22
CIPC-207ENST00000556863 KCTD2Q14681 263 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
CIPC-207ENST00000556863 ANKRD35Q8N283 1001 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 WASF1Q92558 559 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 INTS4Q96HW7 963 aaKnown RBP16.45■□□□□ 0.22
CIPC-207ENST00000556863 CYP39A1Q9NYL5 469 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 GABRQQ9UN88 632 aa16.45■□□□□ 0.22
CIPC-207ENST00000556863 HSP90AA1P07900 732 aaKnown RBP16.44■□□□□ 0.22
CIPC-207ENST00000556863 CALML3P27482 149 aa16.44■□□□□ 0.22
CIPC-207ENST00000556863 ADORA2AP29274 412 aa16.44■□□□□ 0.22
CIPC-207ENST00000556863 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
CIPC-207ENST00000556863 ADCY7P51828 1080 aa16.44■□□□□ 0.22
CIPC-207ENST00000556863 NLRP5P59047 1200 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms