RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 STAG2Q8N3U4 1231 aa12.29□□□□□ -0.44
MTHFD1-214ENST00000556771 MAML3Q96JK9 1138 aa12.29□□□□□ -0.44
MTHFD1-214ENST00000556771 JAKMIP1Q96N16 626 aaKnown RBP12.29□□□□□ -0.44
MTHFD1-214ENST00000556771 UBA5Q9GZZ9 404 aa12.29□□□□□ -0.44
MTHFD1-214ENST00000556771 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.29□□□□□ -0.445e-8■■■□□ 18
MTHFD1-214ENST00000556771 UNC93B1Q9H1C4 597 aa12.29□□□□□ -0.44
MTHFD1-214ENST00000556771 SENP2Q9HC62 589 aa12.29□□□□□ -0.44
MTHFD1-214ENST00000556771 HOMER2Q9NSB8 354 aa12.29□□□□□ -0.44
MTHFD1-214ENST00000556771 SLC12A7Q9Y666 1083 aa12.29□□□□□ -0.44
MTHFD1-214ENST00000556771 PLXNA1Q9UIW2 1896 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 MSCO60682 206 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 PGK2P07205 417 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 SNAP25P60880 206 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 FGD1P98174 961 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 PLCB2Q00722 1185 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 CACNB2Q08289 660 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 FBXO11Q86XK2 927 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 FBXL16Q8N461 479 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 NUP133Q8WUM0 1156 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 MTMR8Q96EF0 704 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 TM6SF1Q9BZW5 370 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 RIOX1Q9H6W3 641 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 JMJD4Q9H9V9 463 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 A1CFQ9NQ94 594 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 FLRT1Q9NZU1 646 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 ABCB11O95342 1321 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 SYNGAP1Q96PV0 1343 aa12.28□□□□□ -0.44
MTHFD1-214ENST00000556771 LOC102724159A0A0B4J2E5 919 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 POTEFA5A3E0 1075 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 POTEB2H3BUK9 544 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 ZBTB5O15062 677 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 SGPL1O95470 568 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 MYCP01106 439 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 ANAPC15P60006 121 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 PWP2Q15269 919 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 QRICH1Q2TAL8 776 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 MAMDC4Q6UXC1 1216 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 SAMD3Q8N6K7 520 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 RGS22Q8NE09 1264 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 U2AF1L4Q8WU68 220 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 TINF2Q9BSI4 451 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 SPZ1Q9BXG8 430 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 AMNQ9BXJ7 453 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 CYP39A1Q9NYL5 469 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 MRPL11Q9Y3B7 192 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 MYH6P13533 1939 aa12.27□□□□□ -0.45
MTHFD1-214ENST00000556771 HTTP42858 3142 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 CYBAP13498 195 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 RPS6KB1P23443 525 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 CYP2C19P33261 490 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 TRIM32Q13049 653 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 COL9A3Q14050 684 aaPredicted RBP12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 PPP2R5BQ15173 497 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 MUM1L1Q5H9M0 696 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 APOA5Q6Q788 366 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 NSMFQ6X4W1 530 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 MCF2L2Q86YR7 1114 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 FAM133AQ8N9E0 248 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 CLEC4DQ8WXI8 215 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 DEFB118Q96PH6 123 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 LRRC2Q9BYS8 371 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 CPVLQ9H3G5 476 aa12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 RBM28Q9NW13 759 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 ADD3Q9UEY8 706 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-214ENST00000556771 PNMA6FA0A0J9YX94 578 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 ASB14A6NK59 587 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 NFIBO00712 420 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 ZBTB43O43298 467 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 EN2P19622 333 aaPredicted RBP12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 USH1GQ495M9 461 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 RUFY3Q7L099 469 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 ANKLE1Q8NAG6 615 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 FANCBQ8NB91 859 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 RRP36Q96EU6 259 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 MPHOSPH6Q99547 160 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 MYL10Q9BUA6 226 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 AGXT2Q9BYV1 514 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 ZSWIM6Q9HCJ5 1215 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 VAT1LQ9HCJ6 419 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 MAP3K20Q9NYL2 800 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 SEC63Q9UGP8 760 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 CNPY2Q9Y2B0 182 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 CYP46A1Q9Y6A2 500 aa12.25□□□□□ -0.45
MTHFD1-214ENST00000556771 CCDC196A0A1B0GTZ2 297 aa12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 PTPDC1A2A3K4 754 aa12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 SMCHD1A6NHR9 2005 aa12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 B4DLN1 442 aa12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 SEPT4O43236 478 aa12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 CYTH3O43739 400 aa12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 TFRCP02786 760 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 CCND3P30281 292 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 MRPL12P52815 198 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 MLLT1Q03111 559 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 Q6ZUG5 572 aa12.24□□□□□ -0.45
MTHFD1-214ENST00000556771 DNERQ8NFT8 737 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms