RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TROAPQ12815 778 aa13.44□□□□□ -0.26
SLIRP-206ENST00000556375 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
SLIRP-206ENST00000556375 CATIPQ7Z7H3 387 aa13.44□□□□□ -0.26
SLIRP-206ENST00000556375 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
SLIRP-206ENST00000556375 CLEC4DQ8WXI8 215 aa13.44□□□□□ -0.26
SLIRP-206ENST00000556375 BAZ2BQ9UIF8 2168 aaKnown RBP13.44□□□□□ -0.26
SLIRP-206ENST00000556375 ABCB11O95342 1321 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 SOWAHBA6NEL2 793 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 SH2B2O14492 632 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-206ENST00000556375 DDAH1O94760 285 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 REC8O95072 547 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 SNAI1O95863 264 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-206ENST00000556375 ZNF865P0CJ78 1059 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-206ENST00000556375 AKR1A1P14550 325 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 COL9A3Q14050 684 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-206ENST00000556375 KRT32Q14532 448 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 QRICH1Q2TAL8 776 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 TSGA10IPQ3SY00 556 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 ARMCX2Q7L311 632 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 ZNF654Q8IZM8 581 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 MAP3K14Q99558 947 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 C11orf49Q9H6J7 331 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 JMJD4Q9H9V9 463 aa13.43□□□□□ -0.26
SLIRP-206ENST00000556375 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-206ENST00000556375 ASTN1O14525 1302 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 LOC102724159A0A0B4J2E5 919 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 ASB14A6NK59 587 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 DNM1LO00429 736 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 RARBP10826 455 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 COL6A1P12109 1028 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 LIFRP42702 1097 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 PWP2Q15269 919 aaKnown RBP13.42□□□□□ -0.26
SLIRP-206ENST00000556375 USH1GQ495M9 461 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 ANO1Q5XXA6 986 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 SLC30A10Q6XR72 485 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 TMTC2Q8N394 836 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 MAF1Q9H063 256 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 ABHD16BQ9H3Z7 469 aa13.42□□□□□ -0.26
SLIRP-206ENST00000556375 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-206ENST00000556375 ZHX1Q9UKY1 873 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-206ENST00000556375 PTPDC1A2A3K4 754 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 CCDC69A6NI79 296 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 ACVR2BQ13705 512 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 BAATQ14032 418 aaPredicted RBP13.41□□□□□ -0.26
SLIRP-206ENST00000556375 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 RNF207Q6ZRF8 634 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 FBXO11Q86XK2 927 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 ARRDC4Q8NCT1 418 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 RGS22Q8NE09 1264 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 CTCFLQ8NI51 663 aaPredicted RBP13.41□□□□□ -0.26
SLIRP-206ENST00000556375 NUP133Q8WUM0 1156 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 KCNB2Q92953 911 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 KATNBL1Q9H079 304 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 XPNPEP3Q9NQH7 507 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 ADD3Q9UEY8 706 aaKnown RBP13.41□□□□□ -0.26
SLIRP-206ENST00000556375 FAM184BQ9ULE4 1060 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 DNAH12Q6ZR08 3092 aa13.41□□□□□ -0.26
SLIRP-206ENST00000556375 KBTBD13C9JR72 458 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 ZBTB5O15062 677 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 EPB41L2O43491 1005 aaKnown RBP13.4□□□□□ -0.26
SLIRP-206ENST00000556375 KIF5BP33176 963 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 HSPA4P34932 840 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 ALDH5A1P51649 535 aaPredicted RBP13.4□□□□□ -0.26
SLIRP-206ENST00000556375 RPS6P62753 249 aaKnown RBP13.4□□□□□ -0.26
SLIRP-206ENST00000556375 SLC35G1Q2M3R5 365 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 ADCK5Q3MIX3 580 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 DPF3Q92784 378 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 MYL10Q9BUA6 226 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 VAT1LQ9HCJ6 419 aa13.4□□□□□ -0.26
SLIRP-206ENST00000556375 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.26
SLIRP-206ENST00000556375 CYTH3O43739 400 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
SLIRP-206ENST00000556375 CALM1P0DP23 149 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 CALM2P0DP24 149 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 CALM3P0DP25 149 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 CALML3P27482 149 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 TRAF1Q13077 416 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 LRRC41Q15345 812 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-206ENST00000556375 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
SLIRP-206ENST00000556375 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 MCF2L2Q86YR7 1114 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 DNERQ8NFT8 737 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 LENG1Q96BZ8 264 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-206ENST00000556375 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
SLIRP-206ENST00000556375 SPZ1Q9BXG8 430 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 SYNRGQ9UMZ2 1314 aa13.39□□□□□ -0.27
SLIRP-206ENST00000556375 EVI5O60447 810 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 PPP1R11O60927 126 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms