RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 RNF146Q9NTX7 359 aa8.82□□□□□ -1
TDP1-214ENST00000556063 SLC5A4Q9NY91 659 aa8.82□□□□□ -1
TDP1-214ENST00000556063 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.82□□□□□ -1
TDP1-214ENST00000556063 PCDHA1Q9Y5I3 950 aa8.82□□□□□ -1
TDP1-214ENST00000556063 DOCK3Q8IZD9 2030 aa8.81□□□□□ -1
TDP1-214ENST00000556063 ZNF536O15090 1300 aa8.81□□□□□ -1
TDP1-214ENST00000556063 CNTNAP5Q8WYK1 1306 aa8.81□□□□□ -1
TDP1-214ENST00000556063 STK36Q9NRP7 1315 aa8.81□□□□□ -1
TDP1-214ENST00000556063 A0A0G2JMZ2 1700 aa8.81□□□□□ -1
TDP1-214ENST00000556063 K7ELQ4 463 aaPredicted RBP8.81□□□□□ -1
TDP1-214ENST00000556063 FOXN1O15353 648 aa8.81□□□□□ -1
TDP1-214ENST00000556063 DEXIO95424 95 aa8.81□□□□□ -1
TDP1-214ENST00000556063 HSP90AA1P07900 732 aaKnown RBP8.81□□□□□ -1
TDP1-214ENST00000556063 FCER1AP12319 257 aa8.81□□□□□ -1
TDP1-214ENST00000556063 SCG2P13521 617 aa8.81□□□□□ -1
TDP1-214ENST00000556063 PSMC4P43686 418 aa8.81□□□□□ -1
TDP1-214ENST00000556063 PRMT2P55345 433 aa8.81□□□□□ -1
TDP1-214ENST00000556063 FUT2Q10981 343 aa8.81□□□□□ -1
TDP1-214ENST00000556063 BECN1Q14457 450 aa8.81□□□□□ -1
TDP1-214ENST00000556063 NTRK3Q16288 839 aa8.81□□□□□ -1
TDP1-214ENST00000556063 USH1GQ495M9 461 aa8.81□□□□□ -1
TDP1-214ENST00000556063 HEATR3Q7Z4Q2 680 aa8.81□□□□□ -1
TDP1-214ENST00000556063 PLEKHH3Q7Z736 793 aa8.81□□□□□ -1
TDP1-214ENST00000556063 TEX2Q8IWB9 1127 aa8.81□□□□□ -1
TDP1-214ENST00000556063 CCDC83Q8IWF9 413 aa8.81□□□□□ -1
TDP1-214ENST00000556063 ABRAQ8N0Z2 381 aa8.81□□□□□ -1
TDP1-214ENST00000556063 FAM177A1Q8N128 213 aaPredicted RBP8.81□□□□□ -1
TDP1-214ENST00000556063 ZNF296Q8WUU4 475 aaPredicted RBP8.81□□□□□ -1
TDP1-214ENST00000556063 SOCS4Q8WXH5 440 aa8.81□□□□□ -1
TDP1-214ENST00000556063 DDX11Q96FC9 970 aa8.81□□□□□ -1
TDP1-214ENST00000556063 AGBL1Q96MI9 1066 aa8.81□□□□□ -1
TDP1-214ENST00000556063 TRERF1Q96PN7 1200 aa8.81□□□□□ -1
TDP1-214ENST00000556063 GLT8D2Q9H1C3 349 aa8.81□□□□□ -1
TDP1-214ENST00000556063 HOMER2Q9NSB8 354 aa8.81□□□□□ -1
TDP1-214ENST00000556063 ORC3Q9UBD5 711 aaPredicted RBP8.81□□□□□ -1
TDP1-214ENST00000556063 TSKSQ9UJT2 592 aa8.81□□□□□ -1
TDP1-214ENST00000556063 CASP8AP2Q9UKL3 1982 aa8.81□□□□□ -1
TDP1-214ENST00000556063 PFASO15067 1338 aa8.8□□□□□ -1
TDP1-214ENST00000556063 SMCHD1A6NHR9 2005 aa8.8□□□□□ -1
TDP1-214ENST00000556063 SLC15A5A6NIM6 579 aa8.8□□□□□ -1
TDP1-214ENST00000556063 LARGE1O95461 756 aa8.8□□□□□ -1
TDP1-214ENST00000556063 HSPA8P11142 646 aaKnown RBP8.8□□□□□ -1
TDP1-214ENST00000556063 MRPL12P52815 198 aaKnown RBP8.8□□□□□ -1
TDP1-214ENST00000556063 LBX1P52954 281 aa8.8□□□□□ -1
TDP1-214ENST00000556063 NAPAP54920 295 aa8.8□□□□□ -1
TDP1-214ENST00000556063 TRIM29Q14134 588 aa8.8□□□□□ -1
TDP1-214ENST00000556063 PFKFB3Q16875 520 aaPredicted RBP8.8□□□□□ -1
TDP1-214ENST00000556063 SLC35G1Q2M3R5 365 aa8.8□□□□□ -1
TDP1-214ENST00000556063 PPP1R18Q6NYC8 613 aa8.8□□□□□ -1
TDP1-214ENST00000556063 POTEEQ6S8J3 1075 aa8.8□□□□□ -1
TDP1-214ENST00000556063 GPR142Q7Z601 462 aa8.8□□□□□ -1
TDP1-214ENST00000556063 ANKRD35Q8N283 1001 aa8.8□□□□□ -1
TDP1-214ENST00000556063 FAM184AQ8NB25 1140 aa8.8□□□□□ -1
TDP1-214ENST00000556063 RGS22Q8NE09 1264 aa8.8□□□□□ -1
TDP1-214ENST00000556063 CCDC148Q8NFR7 591 aa8.8□□□□□ -1
TDP1-214ENST00000556063 CD99L2Q8TCZ2 262 aa8.8□□□□□ -1
TDP1-214ENST00000556063 CUL5Q93034 780 aa8.8□□□□□ -1
TDP1-214ENST00000556063 PHKBQ93100 1093 aa8.8□□□□□ -1
TDP1-214ENST00000556063 MMP19Q99542 508 aa8.8□□□□□ -1
TDP1-214ENST00000556063 NUDT12Q9BQG2 462 aa8.8□□□□□ -1
TDP1-214ENST00000556063 PORCNQ9H237 461 aa8.8□□□□□ -1
TDP1-214ENST00000556063 EFCC1Q9HA90 598 aa8.8□□□□□ -1
TDP1-214ENST00000556063 SH3GLB2Q9NR46 395 aa8.8□□□□□ -1
TDP1-214ENST00000556063 MAP3K20Q9NYL2 800 aaKnown RBP8.8□□□□□ -1
TDP1-214ENST00000556063 MGAMO43451 1857 aa8.79□□□□□ -1
TDP1-214ENST00000556063 hCG_1642624A0A1W2PR95 340 aa8.79□□□□□ -1
TDP1-214ENST00000556063 PTPDC1A2A3K4 754 aa8.79□□□□□ -1
TDP1-214ENST00000556063 B4DLN1 442 aa8.79□□□□□ -1
TDP1-214ENST00000556063 PEX10O60683 326 aa8.79□□□□□ -1
TDP1-214ENST00000556063 CD2BP2O95400 341 aaKnown RBP8.79□□□□□ -1
TDP1-214ENST00000556063 PTPREP23469 700 aa8.79□□□□□ -1
TDP1-214ENST00000556063 CALML3P27482 149 aa8.79□□□□□ -1
TDP1-214ENST00000556063 GNA11P29992 359 aa8.79□□□□□ -1
TDP1-214ENST00000556063 ANP32AP39687 249 aaKnown RBP8.79□□□□□ -1
TDP1-214ENST00000556063 RGS2P41220 211 aa8.79□□□□□ -1
TDP1-214ENST00000556063 MCTP2Q6DN12 878 aa8.79□□□□□ -1
TDP1-214ENST00000556063 NSMFQ6X4W1 530 aa8.79□□□□□ -1
TDP1-214ENST00000556063 RNF207Q6ZRF8 634 aa8.79□□□□□ -1
TDP1-214ENST00000556063 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.79□□□□□ -1
TDP1-214ENST00000556063 DPP9Q86TI2 863 aa8.79□□□□□ -1
TDP1-214ENST00000556063 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
TDP1-214ENST00000556063 NSUN7Q8NE18 718 aaKnown RBP8.79□□□□□ -1
TDP1-214ENST00000556063 BICD2Q8TD16 824 aa8.79□□□□□ -1
TDP1-214ENST00000556063 MPHOSPH6Q99547 160 aaKnown RBP8.79□□□□□ -1
TDP1-214ENST00000556063 C6orf50Q9HD87 102 aa8.79□□□□□ -1
TDP1-214ENST00000556063 PRDM10Q9NQV6 1147 aa8.79□□□□□ -1
TDP1-214ENST00000556063 BARHL2Q9NY43 387 aa8.79□□□□□ -1
TDP1-214ENST00000556063 SMC3Q9UQE7 1217 aa8.79□□□□□ -1
TDP1-214ENST00000556063 RIPK3Q9Y572 518 aa8.79□□□□□ -1
TDP1-214ENST00000556063 ZNFX1Q9P2E3 1918 aaKnown RBP8.79□□□□□ -1
TDP1-214ENST00000556063 ESYT2A0FGR8 921 aa8.78□□□□□ -1
TDP1-214ENST00000556063 POTEB2H3BUK9 544 aa8.78□□□□□ -1
TDP1-214ENST00000556063 GCOM1H8Y6P7 765 aaPredicted RBP8.78□□□□□ -1
TDP1-214ENST00000556063 PPP1R11O60927 126 aaPredicted RBP8.78□□□□□ -1
TDP1-214ENST00000556063 ECM2O94769 699 aaPredicted RBP8.78□□□□□ -1
TDP1-214ENST00000556063 CTDNEP1O95476 244 aa8.78□□□□□ -1
TDP1-214ENST00000556063 CFBP00751 764 aa8.78□□□□□ -1
TDP1-214ENST00000556063 POLR2MP0CAP2 368 aa8.78□□□□□ -1
TDP1-214ENST00000556063 MAP2K5Q13163 448 aa8.78□□□□□ -1
TDP1-214ENST00000556063 CUL4AQ13619 759 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms