RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ALAS1P13196 640 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 SDSP20132 328 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 MRPL12P52815 198 aaKnown RBP9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 CNTN2Q02246 1040 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 TNFAIP2Q03169 654 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 GPATCH4Q5T3I0 446 aaKnown RBP9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 ZNF697Q5TEC3 545 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 MFSD5Q6N075 450 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 CHD1LQ86WJ1 897 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 ESR2Q92731 530 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 FAM227BQ96M60 508 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 TMEM47Q9BQJ4 181 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 SEMA6BQ9H3T3 888 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 VTA1Q9NP79 307 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 INCENPQ9NQS7 918 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 CYP39A1Q9NYL5 469 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 TBX21Q9UL17 535 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 MYH4Q9Y623 1939 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 PLXNA1Q9UIW2 1896 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 COL6A3P12111 3177 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 A0A0D9SFI3 127 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 RBM47A0AV96 593 aaKnown RBP9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 ZNF213O14771 459 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 CTAGE5O15320 804 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 NMT2O60551 498 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 PQBP1O60828 265 aaKnown RBP9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 PDHBP11177 359 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 ITGB8P26012 769 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 NUCB1Q02818 461 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 FPGSQ05932 587 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 PPIGQ13427 754 aaKnown RBP eCLIP9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 SYDE2Q5VT97 1194 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 TAPT1Q6NXT6 567 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 Q7L0L9 218 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 IQCA1Q86XH1 822 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 DNERQ8NFT8 737 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 VTI1AQ96AJ9 217 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 MPHOSPH6Q99547 160 aaKnown RBP9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 DSCC1Q9BVC3 393 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 LNPKQ9C0E8 428 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 AP5M1Q9H0R1 490 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 TOMM22Q9NS69 142 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 CTNNA3Q9UI47 895 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 CCPG1Q9ULG6 757 aa9.16□□□□□ -0.94
PTCSC3-201ENST00000556013 NKRFO15226 690 aaKnown RBP eCLIP9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 CD4P01730 458 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 KCNA4P22459 653 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 ZNF543Q08ER8 600 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 NMIQ13287 307 aaPredicted RBP9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 BAATQ14032 418 aaPredicted RBP9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 DUSP28Q4G0W2 176 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 MUM1L1Q5H9M0 696 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 C9orf50Q5SZB4 431 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 ZNF589Q86UQ0 364 aaPredicted RBP9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 FAM126BQ8IXS8 530 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 TMEM199Q8N511 208 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 RILPL2Q969X0 211 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 HOMER2Q9NSB8 354 aa9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 ISY1Q9ULR0 285 aaKnown RBP9.15□□□□□ -0.94
PTCSC3-201ENST00000556013 MYADML2A6NDP7 307 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 DLL1O00548 723 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 DYNC1LI2O43237 492 aaPredicted RBP9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 ADCY6O43306 1168 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 KPNA6O60684 536 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 SMPD1P17405 629 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 ITGA7Q13683 1181 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 FSCN1Q16658 493 aaKnown RBP9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 CCDC96Q2M329 555 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 BRDTQ58F21 947 aaPredicted RBP9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 RRP12Q5JTH9 1297 aaKnown RBP9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 RASIP1Q5U651 963 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 TTBK2Q6IQ55 1244 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 NSMFQ6X4W1 530 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 KIAA1211Q6ZU35 1233 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 NOL8Q76FK4 1167 aaKnown RBP9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 TLK2Q86UE8 772 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 SAMD3Q8N6K7 520 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 CLEC4DQ8WXI8 215 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 LENG1Q96BZ8 264 aaPredicted RBP9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 RNPC3Q96LT9 517 aaKnown RBP9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 GUCD1Q96NT3 240 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 MAP3K20Q9NYL2 800 aaKnown RBP9.14□□□□□ -0.95
PTCSC3-201ENST00000556013 A0A0C4DFX4 3053 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 ASTN1O14525 1302 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 IGHDP01880 384 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 SUPT20HL2P0C7V6 817 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 EDNRBP24530 442 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 SLC16A2P36021 539 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 CPT1AP50416 773 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 ALDH5A1P51649 535 aaPredicted RBP9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 IMMTQ16891 758 aaKnown RBP9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 B4GALNT3Q6L9W6 998 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 PSRC1Q6PGN9 363 aaPredicted RBP9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 RNF207Q6ZRF8 634 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 RPUSD2Q8IZ73 545 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms