RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 SH3RF1Q7Z6J0 888 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 CCDC144CPQ8IYA2 1237 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 KLHDC9Q8NEP7 349 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 TRERF1Q96PN7 1200 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 DSCC1Q9BVC3 393 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 CPVLQ9H3G5 476 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 CYP39A1Q9NYL5 469 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 ATP11BQ9Y2G3 1177 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 TAF6LQ9Y6J9 622 aa10.97□□□□□ -0.65
VIPAS39-207ENST00000555854 UNC80Q8N2C7 3258 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 A0A0C4DFX4 3053 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 TRIM43BA6NCK2 446 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 POTEB2H3BUK9 544 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 NFIBO00712 420 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 KDM4AO75164 1064 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 ICAM1P05362 532 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 ITGB8P26012 769 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 CST5P28325 142 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 ACVR2BQ13705 512 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 TKFCQ3LXA3 575 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 TMEM63BQ5T3F8 832 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 SLC30A10Q6XR72 485 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 MFSD6Q6ZSS7 791 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 TDHQ8IZJ6 230 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 CLEC4DQ8WXI8 215 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 TRIM43Q96BQ3 446 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 UPF3AQ9H1J1 476 aaKnown RBP10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 GPCPD1Q9NPB8 672 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 CCPG1Q9ULG6 757 aa10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 CTDP1Q9Y5B0 961 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-207ENST00000555854 PRUNE2Q8WUY3 3088 aa10.96□□□□□ -0.66
VIPAS39-207ENST00000555854 RAD50Q92878 1312 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 B4E1Z4 1266 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 HIP1O00291 1037 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 ZNF213O14771 459 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 DUSP11O75319 330 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 PRR29P0C7W0 189 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 GOLGA8HP0CJ92 632 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 CCDC144BQ3MJ40 725 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 LRIT3Q3SXY7 679 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 RNF180Q86T96 592 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 FBXO16Q8IX29 292 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 ENAHQ8N8S7 591 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 ESR2Q92731 530 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 UBE2OQ9C0C9 1292 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 ABHD16BQ9H3Z7 469 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 RNF41Q9H4P4 317 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 FAM184BQ9ULE4 1060 aa10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 GNEQ9Y223 722 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 SPTBN5Q9NRC6 3674 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-207ENST00000555854 TNKSO95271 1327 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 WDR19Q8NEZ3 1342 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 GABBR2O75899 941 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 CHMLP26374 656 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 ACLYP53396 1101 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 GJA9P57773 515 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 NKX3-2P78367 333 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 PTH1RQ03431 593 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 TLE2Q04725 743 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 SLC35G1Q2M3R5 365 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 TAPT1Q6NXT6 567 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 NSMFQ6X4W1 530 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 SKAP1Q86WV1 359 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 DGKHQ86XP1 1220 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 MORC4Q8TE76 937 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 ANKS1AQ92625 1134 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 TTC14Q96N46 770 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 PDGFCQ9NRA1 345 aa10.94□□□□□ -0.66
VIPAS39-207ENST00000555854 EPHB4P54760 987 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 BAATQ14032 418 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 SEC23AQ15436 765 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 KCNA10Q16322 511 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 C9orf50Q5SZB4 431 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 STOX1Q6ZVD7 989 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 Q7L0L9 218 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 CYB5R4Q7L1T6 521 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 PNMA1Q8ND90 353 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 TSEN34Q9BSV6 310 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 UBA5Q9GZZ9 404 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 PRDM5Q9NQX1 630 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 ZSWIM5Q9P217 1185 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 CHD9Q3L8U1 2897 aa10.93□□□□□ -0.66
VIPAS39-207ENST00000555854 CHD7Q9P2D1 2997 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 MOXD2PA6NHM9 499 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 PQBP1O60828 265 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 ASGR1P07306 291 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 CYP21A2P08686 494 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 C6orf222P0C671 652 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 SMPD1P17405 629 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 EDNRBP24530 442 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 NT5C2P49902 561 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 ALDH5A1P51649 535 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 BEX3Q00994 111 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 FAAP100Q0VG06 881 aa10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 COL9A3Q14050 684 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 IMMTQ16891 758 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 GPATCH4Q5T3I0 446 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-207ENST00000555854 EEPD1Q7L9B9 569 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms