RNA–Protein interactions for RNA: ENST00000555810.5

TUBB3-210, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-210ENST00000555810 ZBED4O75132 1171 aa17.17■□□□□ 0.34
TUBB3-210ENST00000555810 PTCRAQ6ISU1 281 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-210ENST00000555810 TMCO2Q7Z6W1 182 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-210ENST00000555810 SEZ6LQ9BYH1 1024 aa17.17■□□□□ 0.34
TUBB3-210ENST00000555810 HOMER2Q9NSB8 354 aa17.17■□□□□ 0.34
TUBB3-210ENST00000555810 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
TUBB3-210ENST00000555810 ZNF536O15090 1300 aa17.17■□□□□ 0.34
TUBB3-210ENST00000555810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-210ENST00000555810 DCXO43602 365 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 PRKAB2O43741 272 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 PDE6AP16499 860 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 SMPD1P17405 629 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 LEXMQ3ZCV2 418 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 TMEM63BQ5T3F8 832 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 EEPD1Q7L9B9 569 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 PPP1R13LQ8WUF5 828 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 KIFC2Q96AC6 838 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 KCNH6Q9H252 994 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 ARMT1Q9H993 441 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 PDGFCQ9NRA1 345 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
TUBB3-210ENST00000555810 TRIP12Q14669 1992 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-210ENST00000555810 TNKSO95271 1327 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 ZNF532Q9HCE3 1301 aa17.16■□□□□ 0.34
TUBB3-210ENST00000555810 SUPT20HL2P0C7V6 817 aa17.15■□□□□ 0.34
TUBB3-210ENST00000555810 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
TUBB3-210ENST00000555810 ITPRIPQ8IWB1 547 aa17.15■□□□□ 0.34
TUBB3-210ENST00000555810 PRPF38AQ8NAV1 312 aaKnown RBP17.15■□□□□ 0.34
TUBB3-210ENST00000555810 ZBED2Q9BTP6 218 aa17.15■□□□□ 0.34
TUBB3-210ENST00000555810 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-210ENST00000555810 FAM47CQ5HY64 1035 aa17.14■□□□□ 0.33
TUBB3-210ENST00000555810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.14■□□□□ 0.33
TUBB3-210ENST00000555810 RETREG2Q8NC44 543 aa17.14■□□□□ 0.33
TUBB3-210ENST00000555810 LMCD1Q9NZU5 365 aa17.14■□□□□ 0.33
TUBB3-210ENST00000555810 FBXO40Q9UH90 709 aa17.14■□□□□ 0.33
TUBB3-210ENST00000555810 ZNF318Q5VUA4 2279 aa17.13■□□□□ 0.33
TUBB3-210ENST00000555810 KCNJ6P48051 423 aa17.13■□□□□ 0.33
TUBB3-210ENST00000555810 HFE2Q6ZVN8 426 aa17.13■□□□□ 0.33
TUBB3-210ENST00000555810 CHST13Q8NET6 341 aa17.13■□□□□ 0.33
TUBB3-210ENST00000555810 SUGCTQ9HAC7 445 aa17.13■□□□□ 0.33
TUBB3-210ENST00000555810 GREB1LQ9C091 1923 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-210ENST00000555810 MYH4Q9Y623 1939 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 SOWAHBA6NEL2 793 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 GRXCR2A6NFK2 248 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 USP17L21D6R901 530 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 F5H6K3 240 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 H3BQ06 376 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-210ENST00000555810 ATP2A1O14983 1001 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 MYL3P08590 195 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 IQCF3P0C7M6 154 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 MS4A1P11836 297 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 RLBP1P12271 317 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 RFC2P35250 354 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 KLRC3Q07444 240 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 C16orf86Q6ZW13 317 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 FBXO16Q8IX29 292 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-210ENST00000555810 AMOTL1Q8IY63 956 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 TANC1Q9C0D5 1861 aa17.12■□□□□ 0.33
TUBB3-210ENST00000555810 POTEB3A0JP26 581 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 ASB14A6NK59 587 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 NDUFB10O96000 172 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 POTEBQ6S5H4 581 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 EP400NLQ6ZTU2 488 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 FAM133AQ8N9E0 248 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.11■□□□□ 0.33
TUBB3-210ENST00000555810 C1orf115Q9H7X2 142 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 SLC38A10Q9HBR0 1119 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 COG6Q9Y2V7 657 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 SIP14410 1827 aa17.11■□□□□ 0.33
TUBB3-210ENST00000555810 TCRBV5S4A2TA0A5A2 114 aa17.1■□□□□ 0.33
TUBB3-210ENST00000555810 MBD4O95243 580 aa17.1■□□□□ 0.33
TUBB3-210ENST00000555810 IQSEC1Q6DN90 963 aa17.1■□□□□ 0.33
TUBB3-210ENST00000555810 TAPT1Q6NXT6 567 aa17.1■□□□□ 0.33
TUBB3-210ENST00000555810 AACSQ86V21 672 aa17.1■□□□□ 0.33
TUBB3-210ENST00000555810 DNAJC2Q99543 621 aaKnown RBP17.1■□□□□ 0.33
TUBB3-210ENST00000555810 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.1■□□□□ 0.33
TUBB3-210ENST00000555810 ATP8A2Q9NTI2 1148 aa17.1■□□□□ 0.33
TUBB3-210ENST00000555810 USP34Q70CQ2 3546 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 GOLIM4O00461 696 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 ST18O60284 1047 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 WDR5P61964 334 aaKnown RBP17.09■□□□□ 0.33
TUBB3-210ENST00000555810 DEFB103AP81534 67 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 NBPF20Q3BBV1 942 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 FAM117BQ6P1L5 589 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 MFSD14AQ96MC6 490 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 TGS1Q96RS0 853 aaKnown RBP17.09■□□□□ 0.33
TUBB3-210ENST00000555810 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 BCL11AQ9H165 835 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 ACAD9Q9H845 621 aa17.09■□□□□ 0.33
TUBB3-210ENST00000555810 A1CFQ9NQ94 594 aaKnown RBP17.09■□□□□ 0.33
TUBB3-210ENST00000555810 GPHNQ9NQX3 736 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-210ENST00000555810 ISY1Q9ULR0 285 aaKnown RBP17.09■□□□□ 0.33
TUBB3-210ENST00000555810 RBAK-RBAKDNI3L0D1 243 aa17.08■□□□□ 0.32
TUBB3-210ENST00000555810 BAIAP3O94812 1187 aa17.08■□□□□ 0.32
TUBB3-210ENST00000555810 CHMP4BP1P59074 171 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms