RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 PDLIM7Q9NR12 457 aa18.11■□□□□ 0.49
SNX6-205ENST00000555648 TMEM39AQ9NV64 488 aa18.11■□□□□ 0.49
SNX6-205ENST00000555648 CYP39A1Q9NYL5 469 aa18.11■□□□□ 0.49
SNX6-205ENST00000555648 ADD3Q9UEY8 706 aaKnown RBP18.11■□□□□ 0.49
SNX6-205ENST00000555648 NEDD4P46934 1319 aa18.1■□□□□ 0.49
SNX6-205ENST00000555648 PTPDC1A2A3K4 754 aa18.1■□□□□ 0.49
SNX6-205ENST00000555648 SOWAHBA6NEL2 793 aa18.1■□□□□ 0.49
SNX6-205ENST00000555648 KDM4AO75164 1064 aa18.1■□□□□ 0.49
SNX6-205ENST00000555648 RAG1P15918 1043 aa18.1■□□□□ 0.49
SNX6-205ENST00000555648 ZNF543Q08ER8 600 aa18.1■□□□□ 0.49
SNX6-205ENST00000555648 GPATCH4Q5T3I0 446 aaKnown RBP18.1■□□□□ 0.49
SNX6-205ENST00000555648 RUFY2Q8WXA3 655 aa18.1■□□□□ 0.49
SNX6-205ENST00000555648 MPHOSPH6Q99547 160 aaKnown RBP18.1■□□□□ 0.49
SNX6-205ENST00000555648 KRT23Q9C075 422 aa18.1■□□□□ 0.49
SNX6-205ENST00000555648 MROH7Q68CQ1 1323 aa18.09■□□□□ 0.49
SNX6-205ENST00000555648 ZEB2O60315 1214 aa18.09■□□□□ 0.49
SNX6-205ENST00000555648 CST5P28325 142 aaPredicted RBP18.09■□□□□ 0.49
SNX6-205ENST00000555648 GJA9P57773 515 aa18.09■□□□□ 0.49
SNX6-205ENST00000555648 BAATQ14032 418 aaPredicted RBP18.09■□□□□ 0.49
SNX6-205ENST00000555648 EEPD1Q7L9B9 569 aa18.09■□□□□ 0.49
SNX6-205ENST00000555648 DEFB123Q8N688 67 aa18.09■□□□□ 0.49
SNX6-205ENST00000555648 UBAC1Q9BSL1 405 aa18.09■□□□□ 0.49
SNX6-205ENST00000555648 CNNM2Q9H8M5 875 aa18.09■□□□□ 0.49
SNX6-205ENST00000555648 FRMPD3Q5JV73 1810 aa18.09■□□□□ 0.49
SNX6-205ENST00000555648 ELP1O95163 1332 aa18.08■□□□□ 0.49
SNX6-205ENST00000555648 MYADML2A6NDP7 307 aa18.08■□□□□ 0.48
SNX6-205ENST00000555648 B4E1Z4 1266 aa18.08■□□□□ 0.48
SNX6-205ENST00000555648 ASGR1P07306 291 aa18.08■□□□□ 0.48
SNX6-205ENST00000555648 IRX6P78412 446 aaPredicted RBP18.08■□□□□ 0.48
SNX6-205ENST00000555648 SH3RF1Q7Z6J0 888 aa18.08■□□□□ 0.48
SNX6-205ENST00000555648 TOX2Q96NM4 488 aa18.08■□□□□ 0.48
SNX6-205ENST00000555648 ZSCAN10Q96SZ4 725 aaPredicted RBP18.08■□□□□ 0.48
SNX6-205ENST00000555648 UPF3AQ9H1J1 476 aaKnown RBP18.08■□□□□ 0.48
SNX6-205ENST00000555648 A0A0U1RQG5 324 aaPredicted RBP18.07■□□□□ 0.48
SNX6-205ENST00000555648 TRIM43BA6NCK2 446 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 B4DLN1 442 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 DHX16O60231 1041 aaKnown RBP18.07■□□□□ 0.48
SNX6-205ENST00000555648 CALML3P27482 149 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
SNX6-205ENST00000555648 TRDNQ13061 729 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 TTC22Q5TAA0 569 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 IQSEC1Q6DN90 963 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 RNF207Q6ZRF8 634 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 ANKRD33Q7Z3H0 272 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 TLK2Q86UE8 772 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 FBXO16Q8IX29 292 aaPredicted RBP18.07■□□□□ 0.48
SNX6-205ENST00000555648 PNMA1Q8ND90 353 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 TRIM43Q96BQ3 446 aaPredicted RBP18.07■□□□□ 0.48
SNX6-205ENST00000555648 VTA1Q9NP79 307 aa18.07■□□□□ 0.48
SNX6-205ENST00000555648 ZNFX1Q9P2E3 1918 aaKnown RBP18.06■□□□□ 0.48
SNX6-205ENST00000555648 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.06■□□□□ 0.48
SNX6-205ENST00000555648 NFIBO00712 420 aa18.06■□□□□ 0.48
SNX6-205ENST00000555648 TLR3O15455 904 aaKnown RBP18.06■□□□□ 0.48
SNX6-205ENST00000555648 DYNC1LI2O43237 492 aaPredicted RBP18.06■□□□□ 0.48
SNX6-205ENST00000555648 GOLGA8HP0CJ92 632 aa18.06■□□□□ 0.48
SNX6-205ENST00000555648 SNHG28P0DPA3 235 aa18.06■□□□□ 0.48
SNX6-205ENST00000555648 CCSAPQ6IQ19 270 aaPredicted RBP18.06■□□□□ 0.48
SNX6-205ENST00000555648 KATNBL1Q9H079 304 aa18.06■□□□□ 0.48
SNX6-205ENST00000555648 WDR19Q8NEZ3 1342 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 RAD50Q92878 1312 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 LOC102724159A0A0B4J2E5 919 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 KIAA0355O15063 1070 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 ADCY6O43306 1168 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 CABYRO75952 493 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 ALDH5A1P51649 535 aaPredicted RBP18.05■□□□□ 0.48
SNX6-205ENST00000555648 BEX3Q00994 111 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 PWP2Q15269 919 aaKnown RBP18.05■□□□□ 0.48
SNX6-205ENST00000555648 SHHQ15465 462 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 FSCN1Q16658 493 aaKnown RBP18.05■□□□□ 0.48
SNX6-205ENST00000555648 USH1GQ495M9 461 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 ASPRV1Q53RT3 343 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 Q7L0L9 218 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 UBA5Q9GZZ9 404 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 ZSWIM5Q9P217 1185 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 PLXNA1Q9UIW2 1896 aa18.05■□□□□ 0.48
SNX6-205ENST00000555648 TNKSO95271 1327 aa18.04■□□□□ 0.48
SNX6-205ENST00000555648 ARVCFO00192 962 aa18.04■□□□□ 0.48
SNX6-205ENST00000555648 PARP1P09874 1014 aaKnown RBP18.04■□□□□ 0.48
SNX6-205ENST00000555648 SMPD1P17405 629 aa18.04■□□□□ 0.48
SNX6-205ENST00000555648 PDE4AP27815 886 aa18.04■□□□□ 0.48
SNX6-205ENST00000555648 IRX5P78411 483 aaPredicted RBP18.04■□□□□ 0.48
SNX6-205ENST00000555648 FPGSQ05932 587 aa18.04■□□□□ 0.48
SNX6-205ENST00000555648 PDE4DQ08499 809 aa18.04■□□□□ 0.48
SNX6-205ENST00000555648 FAAP100Q0VG06 881 aa18.04■□□□□ 0.48
SNX6-205ENST00000555648 IFIT1BQ5T764 474 aaKnown RBP18.04■□□□□ 0.48
SNX6-205ENST00000555648 PURBQ96QR8 312 aaKnown RBP18.04■□□□□ 0.48
SNX6-205ENST00000555648 PDGFCQ9NRA1 345 aa18.04■□□□□ 0.48
SNX6-205ENST00000555648 GNEQ9Y223 722 aaKnown RBP18.04■□□□□ 0.48
SNX6-205ENST00000555648 Q9Y3F1 56 aa18.04■□□□□ 0.48
SNX6-205ENST00000555648 GSPT1P15170 499 aaKnown RBP18.03■□□□□ 0.48
SNX6-205ENST00000555648 CDC37Q16543 378 aaPredicted RBP18.03■□□□□ 0.48
SNX6-205ENST00000555648 CXCL17Q6UXB2 119 aa18.03■□□□□ 0.48
SNX6-205ENST00000555648 SLC30A10Q6XR72 485 aa18.03■□□□□ 0.48
SNX6-205ENST00000555648 ENAHQ8N8S7 591 aaPredicted RBP18.03■□□□□ 0.48
SNX6-205ENST00000555648 CLEC4DQ8WXI8 215 aa18.03■□□□□ 0.48
SNX6-205ENST00000555648 ANKS1AQ92625 1134 aa18.03■□□□□ 0.48
SNX6-205ENST00000555648 RNPC3Q96LT9 517 aaKnown RBP18.03■□□□□ 0.48
SNX6-205ENST00000555648 DDX49Q9Y6V7 483 aaKnown RBP18.03■□□□□ 0.48
SNX6-205ENST00000555648 U3KPZ7 1027 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms