RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 NONOQ15233 471 aaKnown RBP eCLIP11.64□□□□□ -0.55
NEK9-205ENST00000555405 RBM46Q8TBY0 533 aaKnown RBP11.64□□□□□ -0.55
NEK9-205ENST00000555405 PLIN2Q99541 437 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 PPP1R9AQ9ULJ8 1098 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 SIPA1L1O43166 1804 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 COL2A1P02458 1487 aaPredicted RBP11.64□□□□□ -0.55
NEK9-205ENST00000555405 TCHHQ07283 1943 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 A0A1B0GVL5 298 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 NFIBO00712 420 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 PDIA4P13667 645 aaKnown RBP11.64□□□□□ -0.55
NEK9-205ENST00000555405 PPATQ06203 517 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 CSPP1Q1MSJ5 1256 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 RTEL1Q9NZ71 1219 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 RIPK3Q9Y572 518 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 SPDYE5A6NIY4 337 aa11.63□□□□□ -0.55
NEK9-205ENST00000555405 SORBS3O60504 671 aa11.63□□□□□ -0.55
NEK9-205ENST00000555405 TOB1P50616 345 aaPredicted RBP11.63□□□□□ -0.55
NEK9-205ENST00000555405 SMCHD1A6NHR9 2005 aa11.63□□□□□ -0.55
NEK9-205ENST00000555405 VWA3AA6NCI4 1184 aa11.63□□□□□ -0.55
NEK9-205ENST00000555405 ITGBL1O95965 494 aaPredicted RBP11.63□□□□□ -0.55
NEK9-205ENST00000555405 MYCLP12524 364 aaPredicted RBP11.63□□□□□ -0.55
NEK9-205ENST00000555405 U2AF2P26368 475 aaKnown RBP eCLIP11.63□□□□□ -0.55
NEK9-205ENST00000555405 SNAPC2Q13487 334 aa11.63□□□□□ -0.55
NEK9-205ENST00000555405 RILPL1Q5EBL4 403 aa11.63□□□□□ -0.55
NEK9-205ENST00000555405 SLC30A10Q6XR72 485 aa11.63□□□□□ -0.55
NEK9-205ENST00000555405 FSIP1Q8NA03 581 aa11.63□□□□□ -0.55
NEK9-205ENST00000555405 TRERF1Q96PN7 1200 aa11.63□□□□□ -0.55
NEK9-205ENST00000555405 VWA5AO00534 786 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 PTGDRQ13258 359 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 NPY5RQ15761 445 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 MUM1L1Q5H9M0 696 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 ERCC4Q92889 916 aaPredicted RBP11.62□□□□□ -0.55
NEK9-205ENST00000555405 ZMYND12Q9H0C1 365 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 ASCC2Q9H1I8 757 aaPredicted RBP11.62□□□□□ -0.55
NEK9-205ENST00000555405 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 HOXC10Q9NYD6 342 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 MRPL11Q9Y3B7 192 aaKnown RBP11.62□□□□□ -0.55
NEK9-205ENST00000555405 FOCADQ5VW36 1801 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 STAT3P40763 770 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 GRIN1Q05586 938 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 CATSPERGQ6ZRH7 1159 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 PCDHA7Q9UN72 937 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 GCOM1H8Y6P7 765 aaPredicted RBP11.62□□□□□ -0.55
NEK9-205ENST00000555405 POLR2MP0CAP2 368 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 LIG1P18858 919 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 EIF2AK2P19525 551 aaKnown RBP11.62□□□□□ -0.55
NEK9-205ENST00000555405 TXKP42681 527 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 NOL9Q5SY16 702 aaKnown RBP11.62□□□□□ -0.55
NEK9-205ENST00000555405 LINC00301Q8NCQ3 95 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 GINM1Q9NU53 330 aa11.62□□□□□ -0.55
NEK9-205ENST00000555405 TDP2O95551 362 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 SMARCA1P28370 1054 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 CCDC73Q6ZRK6 1079 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 KRT25Q7Z3Z0 450 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 ANKRD35Q8N283 1001 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 GPT2Q8TD30 523 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 SH3GLB2Q9NR46 395 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 NID2Q14112 1375 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 DSG3P32926 999 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 DHX8Q14562 1220 aaKnown RBP11.61□□□□□ -0.55
NEK9-205ENST00000555405 TMEM132BQ14DG7 1078 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 LDLRAD1Q5T700 205 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 ANKRD13CQ8N6S4 541 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 SPDYE16A6NNV3 312 aaPredicted RBP11.61□□□□□ -0.55
NEK9-205ENST00000555405 PPIL2Q13356 520 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 BAATQ14032 418 aaPredicted RBP11.61□□□□□ -0.55
NEK9-205ENST00000555405 PRR16Q569H4 304 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 CYP4F22Q6NT55 531 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 BTNL9Q6UXG8 535 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 EEPD1Q7L9B9 569 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 ANO3Q9BYT9 981 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 RIC8AQ9NPQ8 531 aa11.61□□□□□ -0.55
NEK9-205ENST00000555405 PDHXO00330 501 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 CXCL11O14625 94 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 KIF3CO14782 793 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 SP4Q02446 784 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 NEK8Q86SG6 692 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 CKAP2LQ8IYA6 745 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 SLC38A10Q9HBR0 1119 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 DACT1Q9NYF0 836 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 OSBPP22059 807 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 UBE2HP62256 183 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 HERVK_113P62684 666 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 FASTKD5Q7L8L6 764 aaKnown RBP11.6□□□□□ -0.55
NEK9-205ENST00000555405 JMYQ8N9B5 988 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 SDF4Q9BRK5 362 aa11.6□□□□□ -0.55
NEK9-205ENST00000555405 RANBP17Q9H2T7 1088 aaKnown RBP11.6□□□□□ -0.55
NEK9-205ENST00000555405 A0A087WWV3 80 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 BTBD19C9JJ37 291 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 DDX39AO00148 427 aaKnown RBP11.59□□□□□ -0.55
NEK9-205ENST00000555405 ICAM1P05362 532 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 CYP2W1Q8TAV3 490 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 TMEM60Q9H2L4 133 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 R3HDMLQ9H3Y0 253 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 RCOR1Q9UKL0 485 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 MYH6P13533 1939 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 RPS6P62753 249 aaKnown RBP11.59□□□□□ -0.55
NEK9-205ENST00000555405 SLC39A14Q15043 492 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 ISM2Q6H9L7 571 aa11.59□□□□□ -0.55
NEK9-205ENST00000555405 RNF207Q6ZRF8 634 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms