RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 AP5M1Q9H0R1 490 aa14.88□□□□□ -0.03
TMEM253-205ENST00000555314 HIPK3Q9H422 1215 aa14.88□□□□□ -0.03
TMEM253-205ENST00000555314 PRDM12Q9H4Q4 367 aa14.88□□□□□ -0.03
TMEM253-205ENST00000555314 EPB41L4AQ9HCS5 686 aaPredicted RBP14.88□□□□□ -0.03
TMEM253-205ENST00000555314 A1CFQ9NQ94 594 aaKnown RBP14.88□□□□□ -0.03
TMEM253-205ENST00000555314 CHD9Q3L8U1 2897 aa14.88□□□□□ -0.03
TMEM253-205ENST00000555314 BAZ2AQ9UIF9 1905 aaKnown RBP14.88□□□□□ -0.03
TMEM253-205ENST00000555314 PFKMP08237 780 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 CYP2C18P33260 490 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 SLC4A3P48751 1232 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 IRX5P78411 483 aaPredicted RBP14.87□□□□□ -0.03
TMEM253-205ENST00000555314 CNTN2Q02246 1040 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 ITGA7Q13683 1181 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 CXCL17Q6UXB2 119 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 RPUSD2Q8IZ73 545 aaKnown RBP14.87□□□□□ -0.03
TMEM253-205ENST00000555314 MORC4Q8TE76 937 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 NOC4LQ9BVI4 516 aaKnown RBP14.87□□□□□ -0.03
TMEM253-205ENST00000555314 PPP1R12CQ9BZL4 782 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 BCL11AQ9H165 835 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 SLC28A3Q9HAS3 691 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 RNF146Q9NTX7 359 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 MYH8P13535 1937 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 ASTN1O14525 1302 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 ZNF536O15090 1300 aa14.87□□□□□ -0.03
TMEM253-205ENST00000555314 COL11A1P12107 1806 aaPredicted RBP14.87□□□□□ -0.03
TMEM253-205ENST00000555314 PLXNA1Q9UIW2 1896 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 SOWAHBA6NEL2 793 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 GRXCR1A8MXD5 290 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 TMEM232C9JQI7 657 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 TSPY3P0CV98 308 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 TSPY8P0CW00 308 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 ACRP10323 421 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 ADGRE1Q14246 886 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 NOL8Q76FK4 1167 aaKnown RBP14.86□□□□□ -0.03
TMEM253-205ENST00000555314 TLK2Q86UE8 772 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 IFNL3Q8IZI9 196 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 VTA1Q9NP79 307 aa14.86□□□□□ -0.03
TMEM253-205ENST00000555314 PRDM1O75626 825 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 APPP05067 770 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 SUPT20HL2P0C7V6 817 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 SLC1A4P43007 532 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 BEX3Q00994 111 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 RCSD1Q6JBY9 416 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 LRRC47Q8N1G4 583 aaKnown RBP14.85□□□□□ -0.03
TMEM253-205ENST00000555314 TRERF1Q96PN7 1200 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 TSPYL2Q9H2G4 693 aaPredicted RBP14.85□□□□□ -0.03
TMEM253-205ENST00000555314 DCTPP1Q9H773 170 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 HOMER2Q9NSB8 354 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 CXXC1Q9P0U4 656 aaPredicted RBP14.85□□□□□ -0.03
TMEM253-205ENST00000555314 PCDHA11Q9Y5I1 949 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 GRIN2DO15399 1336 aa14.85□□□□□ -0.03
TMEM253-205ENST00000555314 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.84□□□□□ -0.03
TMEM253-205ENST00000555314 SMPD1P17405 629 aa14.84□□□□□ -0.03
TMEM253-205ENST00000555314 POU3F3P20264 500 aaPredicted RBP14.84□□□□□ -0.03
TMEM253-205ENST00000555314 TFAP4Q01664 338 aa14.84□□□□□ -0.03
TMEM253-205ENST00000555314 TAPT1Q6NXT6 567 aa14.84□□□□□ -0.03
TMEM253-205ENST00000555314 ADAMTS19Q8TE59 1207 aa14.84□□□□□ -0.03
TMEM253-205ENST00000555314 AGBL1Q96MI9 1066 aa14.84□□□□□ -0.03
TMEM253-205ENST00000555314 CYP39A1Q9NYL5 469 aa14.84□□□□□ -0.03
TMEM253-205ENST00000555314 SLC4A7Q9Y6M7 1214 aa14.84□□□□□ -0.03
TMEM253-205ENST00000555314 DYNC1LI2O43237 492 aaPredicted RBP14.83□□□□□ -0.04
TMEM253-205ENST00000555314 SMARCA5O60264 1052 aaPredicted RBP14.83□□□□□ -0.04
TMEM253-205ENST00000555314 NOVP48745 357 aa14.83□□□□□ -0.04
TMEM253-205ENST00000555314 PPARAQ07869 468 aa14.83□□□□□ -0.04
TMEM253-205ENST00000555314 IKQ13123 557 aaPredicted RBP14.83□□□□□ -0.04
TMEM253-205ENST00000555314 AAK1Q2M2I8 961 aa14.83□□□□□ -0.04
TMEM253-205ENST00000555314 DUSP28Q4G0W2 176 aa14.83□□□□□ -0.04
TMEM253-205ENST00000555314 STK11IPQ8N1F8 1099 aa14.83□□□□□ -0.04
TMEM253-205ENST00000555314 POLR3EQ9NVU0 708 aa14.83□□□□□ -0.04
TMEM253-205ENST00000555314 ADD3Q9UEY8 706 aaKnown RBP14.83□□□□□ -0.04
TMEM253-205ENST00000555314 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
TMEM253-205ENST00000555314 PNMA2Q9UL42 364 aa14.83□□□□□ -0.04
TMEM253-205ENST00000555314 YBX2Q9Y2T7 364 aaKnown RBP14.83□□□□□ -0.04
TMEM253-205ENST00000555314 TTC41PQ6P2S7 1318 aa14.83□□□□□ -0.04
TMEM253-205ENST00000555314 M0R2C6 588 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 ERC2O15083 957 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 B4GALT4O60513 344 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 ICAM1P05362 532 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 ALAS1P13196 640 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 COL9A1P20849 921 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 MCCP23508 829 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 OTOP2Q7RTS6 562 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 IL27Q8NEV9 243 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 UHRF1Q96T88 793 aaPredicted RBP14.82□□□□□ -0.04
TMEM253-205ENST00000555314 NAPBQ9H115 298 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 TRPV6Q9H1D0 765 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 WNT8AQ9H1J5 351 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 ALDH8A1Q9H2A2 487 aaPredicted RBP14.82□□□□□ -0.04
TMEM253-205ENST00000555314 NKX2-4Q9H2Z4 354 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 RCAN3Q9UKA8 241 aa14.82□□□□□ -0.04
TMEM253-205ENST00000555314 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
TMEM253-205ENST00000555314 CHD7Q9P2D1 2997 aa14.81□□□□□ -0.04
TMEM253-205ENST00000555314 RBM47A0AV96 593 aaKnown RBP14.81□□□□□ -0.04
TMEM253-205ENST00000555314 IGFBP4P22692 258 aa14.81□□□□□ -0.04
TMEM253-205ENST00000555314 ZMYM1Q5SVZ6 1142 aa14.81□□□□□ -0.04
TMEM253-205ENST00000555314 BTNL9Q6UXG8 535 aa14.81□□□□□ -0.04
TMEM253-205ENST00000555314 PPM1EQ8WY54 764 aa14.81□□□□□ -0.04
TMEM253-205ENST00000555314 ANAPC4Q9UJX5 808 aa14.81□□□□□ -0.04
TMEM253-205ENST00000555314 PRR12Q9ULL5 1215 aa14.81□□□□□ -0.04
TMEM253-205ENST00000555314 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms