RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 ABCB11O95342 1321 aa28.14■■■□□ 2.09
SDR39U1-209ENST00000554947 KLF18A0A0U1RQI7 1052 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 CYTH3O43739 400 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 EVCP57679 992 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 SLC35G1Q2M3R5 365 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 MAP3K21Q5TCX8 1036 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 MFSD14CQ5VZR4 134 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 FBXO11Q86XK2 927 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 MSL3Q8N5Y2 521 aaKnown RBP28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 BRF1Q92994 677 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 MAML3Q96JK9 1138 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 AMNQ9BXJ7 453 aa28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 A1CFQ9NQ94 594 aaKnown RBP28.13■■■□□ 2.09
SDR39U1-209ENST00000554947 PGK2P07205 417 aa28.12■■■□□ 2.09
SDR39U1-209ENST00000554947 MUM1L1Q5H9M0 696 aa28.12■■■□□ 2.09
SDR39U1-209ENST00000554947 ZNF467Q7Z7K2 595 aaPredicted RBP28.12■■■□□ 2.09
SDR39U1-209ENST00000554947 RGS22Q8NE09 1264 aa28.12■■■□□ 2.09
SDR39U1-209ENST00000554947 FLRT1Q9NZU1 646 aa28.12■■■□□ 2.09
SDR39U1-209ENST00000554947 NID2Q14112 1375 aa28.11■■■□□ 2.09
SDR39U1-209ENST00000554947 PNMA6FA0A0J9YX94 578 aa28.11■■■□□ 2.09
SDR39U1-209ENST00000554947 RXRAP19793 462 aa28.11■■■□□ 2.09
SDR39U1-209ENST00000554947 TMTC3Q6ZXV5 915 aa28.11■■■□□ 2.09
SDR39U1-209ENST00000554947 CLEC4DQ8WXI8 215 aa28.11■■■□□ 2.09
SDR39U1-209ENST00000554947 TMEM106CQ9BVX2 250 aa28.11■■■□□ 2.09
SDR39U1-209ENST00000554947 ALDH8A1Q9H2A2 487 aaPredicted RBP28.11■■■□□ 2.09
SDR39U1-209ENST00000554947 LCTP09848 1927 aa28.1■■■□□ 2.09
SDR39U1-209ENST00000554947 CCL5P13501 91 aa28.1■■■□□ 2.09
SDR39U1-209ENST00000554947 APOBRQ0VD83 1088 aa28.1■■■□□ 2.09
SDR39U1-209ENST00000554947 RTN1Q16799 776 aa28.1■■■□□ 2.09
SDR39U1-209ENST00000554947 SRBD1Q8N5C6 995 aaKnown RBP28.1■■■□□ 2.09
SDR39U1-209ENST00000554947 UPF3BQ9BZI7 483 aaKnown RBP28.1■■■□□ 2.09
SDR39U1-209ENST00000554947 CYP39A1Q9NYL5 469 aa28.1■■■□□ 2.09
SDR39U1-209ENST00000554947 MRPL11Q9Y3B7 192 aaKnown RBP28.1■■■□□ 2.09
SDR39U1-209ENST00000554947 RPTORQ8N122 1335 aa28.1■■■□□ 2.09
SDR39U1-209ENST00000554947 CCDC196A0A1B0GTZ2 297 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 PLEKHA8P1O95397 391 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 CAPN2P17655 700 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 MTFR1Q15390 333 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 USH1GQ495M9 461 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 CCDC144CPQ8IYA2 1237 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 FAM133AQ8N9E0 248 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 RRP36Q96EU6 259 aaKnown RBP28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 PIGSQ96S52 555 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 PDRG1Q9NUG6 133 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 MCM3APO60318 1980 aa28.09■■■□□ 2.09
SDR39U1-209ENST00000554947 GOLGA8AA7E2F4 631 aa28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 GOLGA8BA8MQT2 603 aa28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 POTEB2H3BUK9 544 aa28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 NFIBO00712 420 aa28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 PRKAR2AP13861 404 aaKnown RBP28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 CACNB2Q08289 660 aaPredicted RBP28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 TOB2Q14106 344 aaPredicted RBP28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 MAMDC4Q6UXC1 1216 aa28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 TINF2Q9BSI4 451 aa28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 HMX1Q9NP08 348 aaPredicted RBP28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 PAK6Q9NQU5 681 aaPredicted RBP28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 NRBP1Q9UHY1 535 aa28.08■■■□□ 2.09
SDR39U1-209ENST00000554947 TAL1P17542 331 aaPredicted RBP28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 METAP2P50579 478 aaKnown RBP eCLIP28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 TRIM32Q13049 653 aa28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 NSMFQ6X4W1 530 aa28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 HOMER1Q86YM7 354 aa28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 MCF2L2Q86YR7 1114 aa28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 RAB11FIP4Q86YS3 637 aa28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 SAMD3Q8N6K7 520 aa28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 RNF208Q9H0X6 261 aa28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 UNC93B1Q9H1C4 597 aa28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 SYNGAP1Q96PV0 1343 aa28.07■■■□□ 2.08
SDR39U1-209ENST00000554947 LOC102724159A0A0B4J2E5 919 aa28.06■■■□□ 2.08
SDR39U1-209ENST00000554947 PPP1R11O60927 126 aaPredicted RBP28.06■■■□□ 2.08
SDR39U1-209ENST00000554947 GJB1P08034 283 aa28.06■■■□□ 2.08
SDR39U1-209ENST00000554947 PWP2Q15269 919 aaKnown RBP28.06■■■□□ 2.08
SDR39U1-209ENST00000554947 IFFO2Q5TF58 517 aa28.06■■■□□ 2.08
SDR39U1-209ENST00000554947 FAM217BQ9NTX9 383 aaPredicted RBP28.06■■■□□ 2.08
SDR39U1-209ENST00000554947 SEC63Q9UGP8 760 aaKnown RBP28.06■■■□□ 2.08
SDR39U1-209ENST00000554947 PCDHA1Q9Y5I3 950 aa28.06■■■□□ 2.08
SDR39U1-209ENST00000554947 GHRHRQ02643 423 aa28.05■■■□□ 2.08
SDR39U1-209ENST00000554947 BAATQ14032 418 aaPredicted RBP28.05■■■□□ 2.08
SDR39U1-209ENST00000554947 RNF207Q6ZRF8 634 aa28.05■■■□□ 2.08
SDR39U1-209ENST00000554947 ZNF274Q96GC6 653 aaPredicted RBP28.05■■■□□ 2.08
SDR39U1-209ENST00000554947 FGD4Q96M96 766 aa28.05■■■□□ 2.08
SDR39U1-209ENST00000554947 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.05■■■□□ 2.08
SDR39U1-209ENST00000554947 MAP3K20Q9NYL2 800 aaKnown RBP28.05■■■□□ 2.08
SDR39U1-209ENST00000554947 NAP1L2Q9ULW6 460 aaPredicted RBP28.05■■■□□ 2.08
SDR39U1-209ENST00000554947 CYP2C19P33261 490 aa28.04■■■□□ 2.08
SDR39U1-209ENST00000554947 CNTN2Q02246 1040 aa28.04■■■□□ 2.08
SDR39U1-209ENST00000554947 FUT2Q10981 343 aa28.04■■■□□ 2.08
SDR39U1-209ENST00000554947 ANKRD1Q15327 319 aa28.04■■■□□ 2.08
SDR39U1-209ENST00000554947 PTPDC1A2A3K4 754 aa28.03■■■□□ 2.08
SDR39U1-209ENST00000554947 CYBAP13498 195 aa28.03■■■□□ 2.08
SDR39U1-209ENST00000554947 PDIA3P30101 505 aaKnown RBP28.03■■■□□ 2.08
SDR39U1-209ENST00000554947 CDC27P30260 824 aa28.03■■■□□ 2.08
SDR39U1-209ENST00000554947 RBM25P49756 843 aaKnown RBP28.03■■■□□ 2.08
SDR39U1-209ENST00000554947 RPS6P62753 249 aaKnown RBP28.03■■■□□ 2.08
SDR39U1-209ENST00000554947 C22orf23Q9BZE7 217 aa28.03■■■□□ 2.08
SDR39U1-209ENST00000554947 UPF2Q9HAU5 1272 aaKnown RBP28.03■■■□□ 2.08
SDR39U1-209ENST00000554947 ADD3Q9UEY8 706 aaKnown RBP28.03■■■□□ 2.08
SDR39U1-209ENST00000554947 CNTNAP5Q8WYK1 1306 aa28.02■■■□□ 2.08
SDR39U1-209ENST00000554947 ASB14A6NK59 587 aa28.02■■■□□ 2.08
SDR39U1-209ENST00000554947 MYCP01106 439 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms