RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 SNX29Q8TEQ0 813 aa13.24□□□□□ -0.29
XRCC3-208ENST00000554811 ZNF384Q8TF68 577 aa13.24□□□□□ -0.29
XRCC3-208ENST00000554811 IFIH1Q9BYX4 1025 aaKnown RBP13.24□□□□□ -0.29
XRCC3-208ENST00000554811 H7C1D1 291 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 NFIXQ14938 502 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 NONOQ15233 471 aaKnown RBP eCLIP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 PROCA1Q8NCQ7 364 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 RPGRQ92834 1020 aaKnown RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 RRP36Q96EU6 259 aaKnown RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 NHEJ1Q9H9Q4 299 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 ZEB2O60315 1214 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 KRT83P78385 493 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 CDKAL1Q5VV42 579 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 KCTD16Q68DU8 428 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 ANKRD40Q6AI12 368 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 DNAAF5Q86Y56 855 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 POTEDQ86YR6 584 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 C6orf50Q9HD87 102 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 BSDC1Q9NW68 430 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 ARPP21Q9UBL0 812 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 NOP2P46087 812 aaKnown RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 FOXR1Q6PIV2 292 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 RSRC2Q7L4I2 434 aaKnown RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 SECISBP2LQ93073 1101 aaKnown RBP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
XRCC3-208ENST00000554811 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.23□□□□□ -0.29
XRCC3-208ENST00000554811 FAM237AA0A1B0GTK4 181 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 POTEB2H3BUK9 544 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 OR52Z1P0C646 297 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 LONP1P36776 959 aaKnown RBP13.22□□□□□ -0.29
XRCC3-208ENST00000554811 PDXDC2PQ6P474 469 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 NWD2Q9ULI1 1742 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 ESYT3A0FGR9 886 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 FAM196BA6NMK8 535 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 NKRFO15226 690 aaKnown RBP eCLIP13.22□□□□□ -0.29
XRCC3-208ENST00000554811 RNF40O75150 1001 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 BTDP43251 543 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 SCNN1DP51172 638 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 SNAP25P60880 206 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 RASSF7Q02833 373 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 RAPGEF1Q13905 1077 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 HLTFQ14527 1009 aaKnown RBP eCLIP13.22□□□□□ -0.29
XRCC3-208ENST00000554811 PPP2R5BQ15173 497 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 ABCC6O95255 1503 aa13.22□□□□□ -0.29
XRCC3-208ENST00000554811 EZH2Q15910 746 aaKnown RBP13.21□□□□□ -0.29
XRCC3-208ENST00000554811 NT5DC1Q5TFE4 455 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 SV2BQ7L1I2 683 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 REXO1Q8N1G1 1221 aaKnown RBP13.21□□□□□ -0.29
XRCC3-208ENST00000554811 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.29
XRCC3-208ENST00000554811 PACSIN2Q9UNF0 486 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-208ENST00000554811 LRRIQ3A6PVS8 624 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-208ENST00000554811 ATP1A2P50993 1020 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 GUCY2FP51841 1108 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 APBA1Q02410 837 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 FUT2Q10981 343 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 TCP10Q12799 353 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 P2RX5Q93086 422 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 PCDHA6Q9UN73 950 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 PCDHA8Q9Y5H6 950 aa13.21□□□□□ -0.29
XRCC3-208ENST00000554811 BAZ2AQ9UIF9 1905 aaKnown RBP13.21□□□□□ -0.29
XRCC3-208ENST00000554811 TDP2O95551 362 aa13.21□□□□□ -0.3
XRCC3-208ENST00000554811 MAGEA1P43355 309 aa13.21□□□□□ -0.3
XRCC3-208ENST00000554811 CALCRLQ16602 461 aa13.21□□□□□ -0.3
XRCC3-208ENST00000554811 WHAMMP3Q1A5X7 153 aa13.21□□□□□ -0.3
XRCC3-208ENST00000554811 NFRKBQ6P4R8 1299 aa13.21□□□□□ -0.3
XRCC3-208ENST00000554811 LCMT1Q9UIC8 334 aa13.21□□□□□ -0.3
XRCC3-208ENST00000554811 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 LGALS16A8MUM7 142 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 TACC1O75410 805 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 EIF4A3P38919 411 aaKnown RBP13.2□□□□□ -0.3
XRCC3-208ENST00000554811 PAFAH1B1P43034 410 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 DNM2P50570 870 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 MAP9Q49MG5 647 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 BEND6Q5SZJ8 279 aaPredicted RBP13.2□□□□□ -0.3
XRCC3-208ENST00000554811 APTXQ7Z2E3 356 aaKnown RBP13.2□□□□□ -0.3
XRCC3-208ENST00000554811 CERS3Q8IU89 383 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 CCDC51Q96ER9 411 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 IL17RBQ9NRM6 502 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
XRCC3-208ENST00000554811 BCL9O00512 1426 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 GNAQP50148 359 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 AMPD3Q01432 767 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
XRCC3-208ENST00000554811 KIF1AQ12756 1690 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 RCCD1A6NED2 376 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 FTCDO95954 541 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 KRT79Q5XKE5 535 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 KLHL7Q8IXQ5 586 aa13.2□□□□□ -0.3
XRCC3-208ENST00000554811 ADSSL1Q8N142 457 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms