RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 LRP6O75581 1613 aa10.62□□□□□ -0.71
SYNE2-213ENST00000554805 IVLP07476 585 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 CCDC181Q5TID7 509 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 MAPKAPK5Q8IW41 473 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 NOC3LQ8WTT2 800 aaKnown RBP10.61□□□□□ -0.71
SYNE2-213ENST00000554805 TGFBRAP1Q8WUH2 860 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 NUP58Q9BVL2 599 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 TSPYL1Q9H0U9 437 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 SLC39A2Q9NP94 309 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 DUSP10Q9Y6W6 482 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 A0A1W2PQC6 194 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 TRIM66O15016 1216 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 RNF40O75150 1001 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 FCER1AP12319 257 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 TXKP42681 527 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 AMPD2Q01433 879 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 C2orf54Q08AI8 447 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 NAALADL2Q58DX5 795 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 MUM1L1Q5H9M0 696 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 ANKRD40Q6AI12 368 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 TRAPPC11Q7Z392 1133 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 KRT26Q7Z3Y9 468 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 AFAP1L1Q8TED9 768 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 SECISBP2LQ93073 1101 aaKnown RBP10.61□□□□□ -0.71
SYNE2-213ENST00000554805 CALML4Q96GE6 196 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 TMEM51Q9NW97 253 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 STRCQ7RTU9 1775 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 LDHBP07195 334 aaKnown RBP10.61□□□□□ -0.71
SYNE2-213ENST00000554805 OR52Z1P0C646 297 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 FECHP22830 423 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 CCNE1P24864 410 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 AMPD3Q01432 767 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 TXNRD1Q16881 649 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 SPTY2D1Q68D10 685 aaPredicted RBP10.61□□□□□ -0.71
SYNE2-213ENST00000554805 IQCEQ6IPM2 695 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 RCSD1Q6JBY9 416 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 DYMQ7RTS9 669 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 FBXO33Q7Z6M2 555 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 C2CD5Q86YS7 1000 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 C4orf32Q8N8J7 132 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 MARCH10Q8NA82 808 aaPredicted RBP10.61□□□□□ -0.71
SYNE2-213ENST00000554805 SMCR8Q8TEV9 937 aaPredicted RBP10.61□□□□□ -0.71
SYNE2-213ENST00000554805 RIN2Q8WYP3 895 aaPredicted RBP10.61□□□□□ -0.71
SYNE2-213ENST00000554805 DHTKD1Q96HY7 919 aaPredicted RBP10.61□□□□□ -0.71
SYNE2-213ENST00000554805 RASSF4Q9H2L5 321 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 PSD3Q9NYI0 1048 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 LRWD1Q9UFC0 647 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 MYH2Q9UKX2 1941 aa10.61□□□□□ -0.71
SYNE2-213ENST00000554805 KLRF2D3W0D1 207 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 PSMD14O00487 310 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 TACC1O75410 805 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 SSBP05455 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 ZBED6P86452 979 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 STK4Q13043 487 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 KCNB1Q14721 858 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 NONOQ15233 471 aaKnown RBP eCLIP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 DIXDC1Q155Q3 683 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 WDR59Q6PJI9 974 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 ANKRD13CQ8N6S4 541 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 DNAJC7Q99615 494 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 SEC63Q9UGP8 760 aaKnown RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 RRP15Q9Y3B9 282 aaKnown RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 CASZ1Q86V15 1759 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 SMCO2A6NFE2 343 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 ANKRD65E5RJM6 399 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 MYO1CO00159 1063 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 SRGNP10124 158 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 ENOX2Q16206 610 aaKnown RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 TTI2Q6NXR4 508 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 DGKHQ86XP1 1220 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 GIMAP8Q8ND71 665 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 SETDB2Q96T68 719 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 MED4Q9NPJ6 270 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 BIN2Q9UBW5 565 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 FEZ2Q9UHY8 353 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 LCMT1Q9UIC8 334 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 PDS5AQ29RF7 1337 aaKnown RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 RHOBTB3O94955 611 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 FGRP09769 529 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 ATP2B2Q01814 1243 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 SF3B3Q15393 1217 aaKnown RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 TDRD12Q587J7 1177 aaKnown RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 CACNA2D4Q7Z3S7 1137 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 SH3RF3Q8TEJ3 882 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-213ENST00000554805 ANKRD2Q9GZV1 360 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 RABEP2Q9H5N1 569 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 C6orf50Q9HD87 102 aa10.6□□□□□ -0.71
SYNE2-213ENST00000554805 RCCD1A6NED2 376 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 KLRC4O43908 158 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 BAG3O95817 575 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 GRM4Q14833 912 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 FOXR1Q6PIV2 292 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 SND1Q7KZF4 910 aaKnown RBP eCLIP10.59□□□□□ -0.71
SYNE2-213ENST00000554805 TXNRD3Q86VQ6 643 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 DUSP9Q99956 384 aaKnown RBP10.59□□□□□ -0.71
SYNE2-213ENST00000554805 IFIH1Q9BYX4 1025 aaKnown RBP10.59□□□□□ -0.71
SYNE2-213ENST00000554805 SH3GLB2Q9NR46 395 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 IL17RBQ9NRM6 502 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 COL1A1P02452 1464 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-213ENST00000554805 TBC1D9BQ66K14 1250 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms