RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 EPB41L4AQ9HCS5 686 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-208ENST00000554785 KLHL14Q9P2G3 628 aa2.37□□□□□ -2.03
PRPF39-208ENST00000554785 USP35Q9P2H5 1018 aa2.37□□□□□ -2.03
PRPF39-208ENST00000554785 EFR3BQ9Y2G0 817 aa2.37□□□□□ -2.03
PRPF39-208ENST00000554785 HCFC2Q9Y5Z7 792 aa2.37□□□□□ -2.03
PRPF39-208ENST00000554785 RIMBP3CA6NJZ7 1639 aa2.37□□□□□ -2.03
PRPF39-208ENST00000554785 RIMBP3BA6NNM3 1639 aa2.37□□□□□ -2.03
PRPF39-208ENST00000554785 RIMBP3Q9UFD9 1639 aa2.37□□□□□ -2.03
PRPF39-208ENST00000554785 TEX51A0A1B0GUA7 166 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 OR14I1A6ND48 311 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 OVOL3O00110 214 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 IFNGR1P15260 489 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 PRKCAP17252 672 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 ATP2B1P20020 1258 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 CD247P20963 164 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 GUCY2CP25092 1073 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 NASPP49321 788 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-208ENST00000554785 SRSF3P84103 164 aaKnown RBP2.36□□□□□ -2.03
PRPF39-208ENST00000554785 TMEM132EQ6IEE7 984 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 RBBP8NLQ8NC74 664 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-208ENST00000554785 DHRS1Q96LJ7 313 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 C20orf173Q96LM9 149 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 FCRL3Q96P31 734 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-208ENST00000554785 TM9SF2Q99805 663 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.36□□□□□ -2.031e-9■■■■■ 33.7
PRPF39-208ENST00000554785 CNTD2Q9H8S5 307 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 PPP1R1BQ9UD71 204 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-208ENST00000554785 CNOT11Q9UKZ1 510 aaKnown RBP2.36□□□□□ -2.03
PRPF39-208ENST00000554785 ZNF214Q9UL59 606 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-208ENST00000554785 SHROOM4Q9ULL8 1493 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 SASH1O94885 1247 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 ADRB1P08588 477 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 GSTM1P09488 218 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 PNLIPP16233 465 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 SOX9P48436 509 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 NCKAP1LP55160 1127 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 ERVFRD-1P60508 538 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 MVKQ03426 396 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 ANKRD39Q53RE8 183 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 MCF2L2Q86YR7 1114 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 FIBCD1Q8N539 461 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 TAB3Q8N5C8 712 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-208ENST00000554785 FAM169BQ8N8A8 192 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 DSCC1Q9BVC3 393 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 NOL6Q9H6R4 1146 aaKnown RBP2.36□□□□□ -2.03
PRPF39-208ENST00000554785 CRTAC1Q9NQ79 661 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 IMPACTQ9P2X3 320 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 TNFRSF10DQ9UBN6 386 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 FBLN5Q9UBX5 448 aa2.36□□□□□ -2.03
PRPF39-208ENST00000554785 A0A1W2PQH9 124 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 NUDT19A8MXV4 375 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 IGSF3O75054 1194 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 SSBP05455 408 aaKnown RBP eCLIP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 GSNP06396 782 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 FGRP09769 529 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 IMPDH2P12268 514 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 PI3P19957 117 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 CDR1P51861 262 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 YBX1P67809 324 aaKnown RBP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 VMACQ2NL98 169 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 RPTNQ6XPR3 784 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 IGDCC3Q8IVU1 814 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 TMEFF1Q8IYR6 380 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 NUP43Q8NFH3 380 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 ADCY4Q8NFM4 1077 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 CPLX3Q8WVH0 158 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 TNFRSF12AQ9NP84 129 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 ACSL6Q9UKU0 697 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 CNOT6Q9ULM6 557 aaKnown RBP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 STRIP2Q9ULQ0 834 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 KCTD3Q9Y597 815 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 TAF6LQ9Y6J9 622 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 ZCCHC6Q5VYS8 1495 aaKnown RBP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 A0A1W2PQ45 241 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 A0A1W2PQY0 241 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 WTIPA6NIX2 430 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 HRKO00198 91 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 FGF10O15520 208 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 PPP1R11O60927 126 aaPredicted RBP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 VAMP4O75379 141 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 EPHX1P07099 455 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 GTF2F1P35269 517 aaKnown RBP eCLIP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 GIPRP48546 466 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 CYP4F8P98187 520 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 PPP2R5DQ14738 602 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 SPATS1Q496A3 300 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 NOL9Q5SY16 702 aaKnown RBP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 CYB5RLQ6IPT4 315 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 GALNT18Q6P9A2 607 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 KLHL6Q8WZ60 621 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 UBXN4Q92575 508 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 SHDQ96IW2 340 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 FGD4Q96M96 766 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 ZDHHC15Q96MV8 337 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 KCNC2Q96PR1 638 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 HAUS7Q99871 368 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 LGR4Q9BXB1 951 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 SRRTQ9BXP5 876 aaKnown RBP2.35□□□□□ -2.03
PRPF39-208ENST00000554785 PRR13Q9NZ81 148 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms