RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 PROCA1Q8NCQ7 364 aaPredicted RBP15.28■□□□□ 0.04
VTI1B-204ENST00000554659 MAN1A1P33908 653 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 IRX4P78413 519 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 PRR16Q569H4 304 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 CHURC1Q8WUH1 139 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 ABCC12Q96J65 1359 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 PASKQ96RG2 1323 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 PDE8BO95263 885 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 PEX19P40855 299 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 CCT5P48643 541 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 PDE6CP51160 858 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 RESTQ13127 1097 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 ARHGAP42A6NI28 874 aa15.27■□□□□ 0.04
VTI1B-204ENST00000554659 THAP12O43422 761 aa15.27■□□□□ 0.04
VTI1B-204ENST00000554659 SLFN14P0C7P3 912 aa15.27■□□□□ 0.04
VTI1B-204ENST00000554659 EHHADHQ08426 723 aa15.27■□□□□ 0.04
VTI1B-204ENST00000554659 MAN1B1Q9UKM7 699 aa15.27■□□□□ 0.04
VTI1B-204ENST00000554659 RASSF7Q02833 373 aa15.27■□□□□ 0.04
VTI1B-204ENST00000554659 ZNF658Q5TYW1 1059 aaPredicted RBP15.27■□□□□ 0.04
VTI1B-204ENST00000554659 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.04
VTI1B-204ENST00000554659 OPHN1O60890 802 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 P4HA1P13674 534 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 GYG1P46976 350 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 EXOC3L4Q17RC7 722 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 CCDC117Q8IWD4 279 aaPredicted RBP15.27■□□□□ 0.03
VTI1B-204ENST00000554659 TEKT1Q969V4 418 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 RNF14Q9UBS8 474 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 NSMFQ6X4W1 530 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 FAM178BQ8IXR5 827 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 P2RX5Q93086 422 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 PBRM1Q86U86 1689 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 PTCH1Q13635 1447 aa15.27■□□□□ 0.03
VTI1B-204ENST00000554659 COG7P83436 770 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 CTAGE3PQ8IX95 158 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 CPXCR1Q8N123 301 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 STAG1Q8WVM7 1258 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 HOOK2Q96ED9 719 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 C1orf112Q9NSG2 853 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 USP40Q9NVE5 1235 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 MGEA5O60502 916 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 LMNB1P20700 586 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 MFSD14BQ5SR56 506 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 NLRX1Q86UT6 975 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 SIRT2Q8IXJ6 389 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 EFCAB13Q8IY85 973 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 RRP15Q9Y3B9 282 aaKnown RBP15.26■□□□□ 0.03
VTI1B-204ENST00000554659 M0R2C6 588 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 ENC1O14682 589 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 BAG2O95816 211 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 IFNB1P01574 187 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 ATF2P15336 505 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 CCDC125Q86Z20 511 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 MYCBPQ99417 103 aaPredicted RBP15.26■□□□□ 0.03
VTI1B-204ENST00000554659 PCDHA4Q9UN74 947 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 H0YCG3 227 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 PRPF6O94906 941 aaKnown RBP15.26■□□□□ 0.03
VTI1B-204ENST00000554659 MMP1P03956 469 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 KRT19P08727 400 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 SH3BGRP55822 239 aaPredicted RBP15.26■□□□□ 0.03
VTI1B-204ENST00000554659 TCP10Q12799 353 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 SNCBQ16143 134 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 HADHQ16836 314 aaKnown RBP15.26■□□□□ 0.03
VTI1B-204ENST00000554659 EXOC4Q96A65 974 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 RWDD2AQ9UIY3 292 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
VTI1B-204ENST00000554659 PANX2Q96RD6 677 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 LARSQ9P2J5 1176 aaKnown RBP15.25■□□□□ 0.03
VTI1B-204ENST00000554659 FRMPD2Q68DX3 1309 aaPredicted RBP15.25■□□□□ 0.03
VTI1B-204ENST00000554659 K7ENM7 598 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 PHKA1P46020 1223 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 ANKRD13CQ8N6S4 541 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 LARP4BQ92615 738 aaKnown RBP15.25■□□□□ 0.03
VTI1B-204ENST00000554659 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
VTI1B-204ENST00000554659 MAP3K15Q6ZN16 1313 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 GOLGA8FQ08AF8 430 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 GOLGA8DPQ0D2H9 430 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 PPP4R1Q8TF05 950 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 WDR70Q9NW82 654 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.25■□□□□ 0.033e-6■□□□□ 11.2
VTI1B-204ENST00000554659 TPX2Q9ULW0 747 aaKnown RBP15.25■□□□□ 0.03
VTI1B-204ENST00000554659 ADORA1P30542 326 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 HOXA7P31268 230 aaPredicted RBP15.25■□□□□ 0.03
VTI1B-204ENST00000554659 SESN3P58005 492 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 MAN2A1Q16706 1144 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 DEPTORQ8TB45 409 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 WHAMMQ8TF30 809 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 ATG3Q9NT62 314 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 ATP10DQ9P241 1426 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 SMIM24O75264 130 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 CLTAP09496 248 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 CHRNDQ07001 517 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 FNBP4Q8N3X1 1017 aaPredicted RBP15.25■□□□□ 0.03
VTI1B-204ENST00000554659 TRIM6Q9C030 488 aaPredicted RBP15.25■□□□□ 0.03
VTI1B-204ENST00000554659 FAN1Q9Y2M0 1017 aa15.25■□□□□ 0.03
VTI1B-204ENST00000554659 FAM170AA1A519 330 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 STMN1P16949 149 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 PROSER3Q2NL68 480 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 SARM1Q6SZW1 724 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms