RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TRDNQ13061 729 aa14.49□□□□□ -0.09
SHMT2-214ENST00000554604 LRRC26Q2I0M4 334 aa14.49□□□□□ -0.09
SHMT2-214ENST00000554604 GPATCH4Q5T3I0 446 aaKnown RBP14.49□□□□□ -0.09
SHMT2-214ENST00000554604 NSMFQ6X4W1 530 aa14.49□□□□□ -0.09
SHMT2-214ENST00000554604 RANBP17Q9H2T7 1088 aaKnown RBP14.49□□□□□ -0.09
SHMT2-214ENST00000554604 FAM184BQ9ULE4 1060 aa14.49□□□□□ -0.09
SHMT2-214ENST00000554604 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-214ENST00000554604 TNKSO95271 1327 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 SLC34A2O95436 690 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 SNAI1O95863 264 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-214ENST00000554604 ZNF865P0CJ78 1059 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-214ENST00000554604 SNHG28P0DPA3 235 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 SYN1P17600 705 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 MCM2P49736 904 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 PTH1RQ03431 593 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 LRRC41Q15345 812 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 MUM1L1Q5H9M0 696 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 ARMCX2Q7L311 632 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 RNF180Q86T96 592 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 ENAHQ8N8S7 591 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-214ENST00000554604 LSG1Q9H089 658 aaKnown RBP14.48□□□□□ -0.09
SHMT2-214ENST00000554604 ABHD16BQ9H3Z7 469 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-214ENST00000554604 RBM27Q9P2N5 1060 aaKnown RBP14.48□□□□□ -0.09
SHMT2-214ENST00000554604 PNMA2Q9UL42 364 aa14.48□□□□□ -0.09
SHMT2-214ENST00000554604 BAZ2BQ9UIF8 2168 aaKnown RBP14.47□□□□□ -0.09
SHMT2-214ENST00000554604 LCTP09848 1927 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 ASB14A6NK59 587 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 PGK1P00558 417 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 GOLGA8HP0CJ92 632 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 ADCYAP1R1P41586 468 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 ACVR2BQ13705 512 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 IFIT1BQ5T764 474 aaKnown RBP14.47□□□□□ -0.09
SHMT2-214ENST00000554604 KIAA1211Q6ZU35 1233 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 RALYLQ86SE5 291 aaKnown RBP14.47□□□□□ -0.09
SHMT2-214ENST00000554604 CCDC144CPQ8IYA2 1237 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 FAM133AQ8N9E0 248 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 ANKS1AQ92625 1134 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 FERMT2Q96AC1 680 aa14.47□□□□□ -0.09
SHMT2-214ENST00000554604 DHX16O60231 1041 aaKnown RBP14.46□□□□□ -0.09
SHMT2-214ENST00000554604 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.09
SHMT2-214ENST00000554604 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
SHMT2-214ENST00000554604 LENG1Q96BZ8 264 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-214ENST00000554604 FGD4Q96M96 766 aa14.46□□□□□ -0.09
SHMT2-214ENST00000554604 CYP39A1Q9NYL5 469 aa14.46□□□□□ -0.09
SHMT2-214ENST00000554604 ERICH2A1L162 156 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 PTPDC1A2A3K4 754 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 SOWAHBA6NEL2 793 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 DUSP11O75319 330 aaKnown RBP14.45□□□□□ -0.1
SHMT2-214ENST00000554604 HSP90AA1P07900 732 aaKnown RBP14.45□□□□□ -0.1
SHMT2-214ENST00000554604 CYP21A2P08686 494 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 PARP1P09874 1014 aaKnown RBP14.45□□□□□ -0.1
SHMT2-214ENST00000554604 RTP1P59025 263 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 SLC39A5Q6ZMH5 540 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 UBA5Q9GZZ9 404 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 SPC25Q9HBM1 224 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 ADD3Q9UEY8 706 aaKnown RBP14.45□□□□□ -0.1
SHMT2-214ENST00000554604 PRKAG2Q9UGJ0 569 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 ATP11BQ9Y2G3 1177 aa14.45□□□□□ -0.1
SHMT2-214ENST00000554604 WDR19Q8NEZ3 1342 aa14.44□□□□□ -0.1
SHMT2-214ENST00000554604 SYNRGQ9UMZ2 1314 aa14.44□□□□□ -0.1
SHMT2-214ENST00000554604 NFIBO00712 420 aa14.44□□□□□ -0.1
SHMT2-214ENST00000554604 BAATQ14032 418 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-214ENST00000554604 SART3Q15020 963 aaKnown RBP14.44□□□□□ -0.1
SHMT2-214ENST00000554604 USH1GQ495M9 461 aa14.44□□□□□ -0.1
SHMT2-214ENST00000554604 NOL8Q76FK4 1167 aaKnown RBP14.44□□□□□ -0.1
SHMT2-214ENST00000554604 CYB5R4Q7L1T6 521 aa14.44□□□□□ -0.1
SHMT2-214ENST00000554604 NCOA7Q8NI08 942 aa14.44□□□□□ -0.1
SHMT2-214ENST00000554604 KCNB2Q92953 911 aa14.44□□□□□ -0.1
SHMT2-214ENST00000554604 CPVLQ9H3G5 476 aa14.44□□□□□ -0.1
SHMT2-214ENST00000554604 PHF24Q9UPV7 400 aa14.44□□□□□ -0.1
SHMT2-214ENST00000554604 A0A1W2PPC1 479 aa14.43□□□□□ -0.1
SHMT2-214ENST00000554604 E7EWF7 191 aa14.43□□□□□ -0.1
SHMT2-214ENST00000554604 IFIT3O14879 490 aaKnown RBP14.43□□□□□ -0.1
SHMT2-214ENST00000554604 C6orf222P0C671 652 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-214ENST00000554604 MAGEA10P43363 369 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-214ENST00000554604 FXR1P51114 621 aaKnown RBP eCLIP14.43□□□□□ -0.1
SHMT2-214ENST00000554604 NEK4P51957 841 aa14.43□□□□□ -0.1
SHMT2-214ENST00000554604 CDC37Q16543 378 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-214ENST00000554604 RNF207Q6ZRF8 634 aa14.43□□□□□ -0.1
SHMT2-214ENST00000554604 ADGRF4Q8IZF3 695 aa14.43□□□□□ -0.1
SHMT2-214ENST00000554604 MAP4K1Q92918 833 aa14.43□□□□□ -0.1
SHMT2-214ENST00000554604 GDF15Q99988 308 aa14.43□□□□□ -0.1
SHMT2-214ENST00000554604 LBHD1Q9BQE6 289 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-214ENST00000554604 TSEN34Q9BSV6 310 aaKnown RBP14.43□□□□□ -0.1
SHMT2-214ENST00000554604 PRO3102Q9H379 93 aa14.43□□□□□ -0.1
SHMT2-214ENST00000554604 RBM8AQ9Y5S9 174 aaKnown RBP14.43□□□□□ -0.1
SHMT2-214ENST00000554604 LRRC37A2A6NM11 1700 aa14.43□□□□□ -0.1
SHMT2-214ENST00000554604 ADAMTS4O75173 837 aa14.42□□□□□ -0.1
SHMT2-214ENST00000554604 CALML3P27482 149 aa14.42□□□□□ -0.1
SHMT2-214ENST00000554604 TNFAIP2Q03169 654 aa14.42□□□□□ -0.1
SHMT2-214ENST00000554604 SEC23AQ15436 765 aa14.42□□□□□ -0.1
SHMT2-214ENST00000554604 EEPD1Q7L9B9 569 aa14.42□□□□□ -0.1
SHMT2-214ENST00000554604 NUP133Q8WUM0 1156 aa14.42□□□□□ -0.1
SHMT2-214ENST00000554604 CLEC4DQ8WXI8 215 aa14.42□□□□□ -0.1
SHMT2-214ENST00000554604 MPHOSPH6Q99547 160 aaKnown RBP14.42□□□□□ -0.1
SHMT2-214ENST00000554604 VAT1LQ9HCJ6 419 aa14.42□□□□□ -0.1
SHMT2-214ENST00000554604 SNX14Q9Y5W7 946 aa14.42□□□□□ -0.1
SHMT2-214ENST00000554604 ASTN1O14525 1302 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms