RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 TIFAQ96CG3 184 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 PPP1R12CQ9BZL4 782 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 UPF3AQ9H1J1 476 aaKnown RBP16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 VCANP13611 3396 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 PATL2C9JE40 543 aaKnown RBP16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 TMEM232C9JQI7 657 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 ARVCFO00192 962 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 TLR3O15455 904 aaKnown RBP16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 CSF2RAP15509 400 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 OAZ1P54368 228 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 CCDC174Q6PII3 467 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 TMEM199Q8N511 208 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 USP26Q9BXU7 913 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 NACAP1Q9BZK3 213 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 ZNF576Q9H609 170 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 SYNPO2Q9UMS6 1093 aa16.5■□□□□ 0.23
SPTLC2-202ENST00000554365 STAT2P52630 851 aa16.49■□□□□ 0.23
SPTLC2-202ENST00000554365 BEX3Q00994 111 aa16.49■□□□□ 0.23
SPTLC2-202ENST00000554365 PDE4BQ07343 736 aa16.49■□□□□ 0.23
SPTLC2-202ENST00000554365 TMEM240Q5SV17 173 aa16.49■□□□□ 0.23
SPTLC2-202ENST00000554365 C16orf59Q7L2K0 433 aa16.49■□□□□ 0.23
SPTLC2-202ENST00000554365 NEDD1Q8NHV4 660 aa16.49■□□□□ 0.23
SPTLC2-202ENST00000554365 ACAD9Q9H845 621 aa16.49■□□□□ 0.23
SPTLC2-202ENST00000554365 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 GRXCR1A8MXD5 290 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 REC8O95072 547 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 FDX1P10109 184 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 ACRP10323 421 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 HSPD1P10809 573 aaKnown RBP16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 PBX2P40425 430 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 TFAP4Q01664 338 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 TNFAIP2Q03169 654 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 FAM126BQ8IXS8 530 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 USP38Q8NB14 1042 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 SYMPKQ92797 1274 aaKnown RBP16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 MAP4K1Q92918 833 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 AGBL1Q96MI9 1066 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 KATNBL1Q9H079 304 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 NAPBQ9H115 298 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 RNF146Q9NTX7 359 aa16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 SPTBN5Q9NRC6 3674 aaKnown RBP16.48■□□□□ 0.23
SPTLC2-202ENST00000554365 LAMA4Q16363 1823 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 CTAGE5O15320 804 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 EPB41L2O43491 1005 aaKnown RBP16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 SLC1A4P43007 532 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 PSRC1Q6PGN9 363 aaPredicted RBP16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 CXCL17Q6UXB2 119 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 ZNF365Q70YC5 407 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 FAM160B2Q86V87 743 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 FAM133AQ8N9E0 248 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 CHURC1Q8WUH1 139 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 PPM1EQ8WY54 764 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 DSCC1Q9BVC3 393 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 PBX4Q9BYU1 374 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 A1CFQ9NQ94 594 aaKnown RBP16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 PLIN4Q96Q06 1357 aa16.47■□□□□ 0.23
SPTLC2-202ENST00000554365 MCM3APO60318 1980 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 SOWAHBA6NEL2 793 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 ALAS1P13196 640 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 MCCP23508 829 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 CYP2C18P33260 490 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 SNAP25P60880 206 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 PPARAQ07869 468 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 KCTD1Q719H9 257 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 TLK2Q86UE8 772 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 STAG1Q8WVM7 1258 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 GMCL1Q96IK5 515 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 TRERF1Q96PN7 1200 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 GAS2L1Q99501 681 aaPredicted RBP16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 AP5M1Q9H0R1 490 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 STX8Q9UNK0 236 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 PRUNE2Q8WUY3 3088 aa16.46■□□□□ 0.23
SPTLC2-202ENST00000554365 ASTN1O14525 1302 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 ZNF536O15090 1300 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 ASB14A6NK59 587 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 CD4P01730 458 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 ALX1Q15699 326 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 TKFCQ3LXA3 575 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 RASIP1Q5U651 963 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 EEPD1Q7L9B9 569 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 PRDM12Q9H4Q4 367 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 MTMR7Q9Y216 660 aa16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 RBM8AQ9Y5S9 174 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 DDX49Q9Y6V7 483 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-202ENST00000554365 TSPY2A6NKD2 308 aa16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 DYNC1LI2O43237 492 aaPredicted RBP16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 EIF5BO60841 1220 aaKnown RBP16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 PTGS1P23219 599 aa16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 NKX3-2P78367 333 aa16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 NECTIN1Q15223 517 aa16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 TJAP1Q5JTD0 557 aa16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 HIPK3Q9H422 1215 aa16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 IL23AQ9NPF7 189 aa16.44■□□□□ 0.22
SPTLC2-202ENST00000554365 PRDM6Q9NQX0 595 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms