RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 NAPAP54920 295 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 PKN2Q16513 984 aaKnown RBP2.9□□□□□ -1.94
PRPF39-205ENST00000554081 PAN2Q504Q3 1202 aaKnown RBP2.9□□□□□ -1.94
PRPF39-205ENST00000554081 TMCO4Q5TGY1 634 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 RNF20Q5VTR2 975 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 RNF207Q6ZRF8 634 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 ARRDC4Q8NCT1 418 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 ST13P5Q8NFI4 369 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-205ENST00000554081 NKX2-3Q8TAU0 364 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 ZNF384Q8TF68 577 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 RMDN3Q96TC7 470 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 HAUS7Q99871 368 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 TEX13BQ9BXU2 312 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 DCTPP1Q9H773 170 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 VCPKMTQ9H867 229 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 SLC28A3Q9HAS3 691 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 POLD4Q9HCU8 107 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 PDGFCQ9NRA1 345 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 RBPJLQ9UBG7 517 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 ARPP21Q9UBL0 812 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-205ENST00000554081 CTNNA3Q9UI47 895 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 SUGT1Q9Y2Z0 365 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 AFG3L2Q9Y4W6 797 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 SPTA1P02549 2419 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 UBR3Q6ZT12 1888 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 CHD8Q9HCK8 2581 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 GSG1L2A8MUP6 293 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 HSPD1P10809 573 aaKnown RBP2.9□□□□□ -1.95
PRPF39-205ENST00000554081 SSTR3P32745 418 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-205ENST00000554081 SHMT1P34896 483 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 TNFAIP2Q03169 654 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 FAM110CQ1W6H9 321 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 C12orf60Q5U649 245 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 CPLX2Q6PUV4 134 aaKnown RBP2.9□□□□□ -1.95
PRPF39-205ENST00000554081 USP17L6PQ6QN14 398 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 GLYCTKQ8IVS8 523 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 FAM184AQ8NB25 1140 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 RETREG2Q8NC44 543 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 ARNTL2Q8WYA1 636 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 BRF1Q92994 677 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 GCC1Q96CN9 775 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 MPHOSPH6Q99547 160 aaKnown RBP2.9□□□□□ -1.95
PRPF39-205ENST00000554081 APOL6Q9BWW8 343 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 SLC26A6Q9BXS9 759 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 DOCK3Q8IZD9 2030 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 UNC80Q8N2C7 3258 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 TNKSO95271 1327 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 COL4A5P29400 1685 aa2.9□□□□□ -1.95
PRPF39-205ENST00000554081 KLF18A0A0U1RQI7 1052 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 SPDYE16A6NNV3 312 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 GOLGA8AA7E2F4 631 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 GOLGA8BA8MQT2 603 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 NFIBO00712 420 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CSDE1O75534 798 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 HARSP12081 509 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CASTP20810 708 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 ARID4AP29374 1257 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 MATR3P43243 847 aaKnown RBP eCLIP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CAP1Q01518 475 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 MAP2K5Q13163 448 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 TMEM132BQ14DG7 1078 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 PPP2R5BQ15173 497 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 UBE2SQ16763 222 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CCDC144BQ3MJ40 725 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 TRIM60Q495X7 471 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 AKNAD1Q5T1N1 836 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 FBXO11Q86XK2 927 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 OR6J1Q8NGC5 347 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 NPLOC4Q8TAT6 608 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 BADQ92934 168 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 PHKBQ93100 1093 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 TMEM47Q9BQJ4 181 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 IDI2Q9BXS1 227 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 DNAJC18Q9H819 358 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 NCOA5Q9HCD5 579 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 POLIQ9UNA4 740 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RABGAP1Q9Y3P9 1069 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RBM8AQ9Y5S9 174 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 V9GY48 417 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CCDC171Q6TFL3 1326 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RPTORQ8N122 1335 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF521Q96K83 1311 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 HTTP42858 3142 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RFXAPO00287 272 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 MAFGO15525 162 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 PRC1O43663 620 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 GNAT2P19087 354 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RASA1P20936 1047 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 KCNJ6P48051 423 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 NEK4P51957 841 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RABGGTBP53611 331 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 NLRP5P59047 1200 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 LY6KQ17RY6 165 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 ERICH6BQ5W0A0 696 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 BLOC1S2Q6QNY1 142 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 ANKRD23Q86SG2 305 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RBM23Q86U06 439 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 STAG2Q8N3U4 1231 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 C7orf31Q8N865 590 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 NCOA7Q8NI08 942 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 808.8 ms