RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 TOB2Q14106 344 aaPredicted RBP13.06□□□□□ -0.32
IFT43-206ENST00000554026 RABEP1Q15276 862 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 QRICH1Q2TAL8 776 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 SLC9C1Q4G0N8 1177 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 TMTC3Q6ZXV5 915 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 TEX2Q8IWB9 1127 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 ANKRD35Q8N283 1001 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 RGS22Q8NE09 1264 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 USP6NLQ92738 828 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 AGBL1Q96MI9 1066 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 MAP3K20Q9NYL2 800 aaKnown RBP13.06□□□□□ -0.32
IFT43-206ENST00000554026 CENPFP49454 3210 aa13.06□□□□□ -0.32
IFT43-206ENST00000554026 PLXNB2O15031 1838 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 hCG_1984214I3L0E3 225 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 ST18O60284 1047 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
IFT43-206ENST00000554026 RXRAP19793 462 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 PDIA3P30101 505 aaKnown RBP13.05□□□□□ -0.32
IFT43-206ENST00000554026 GRK4P32298 578 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 UBXN2AP68543 259 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
IFT43-206ENST00000554026 ZNF713Q8N859 430 aaPredicted RBP13.05□□□□□ -0.32
IFT43-206ENST00000554026 TBC1D32Q96NH3 1257 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 HOMER2Q9NSB8 354 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 GABRQQ9UN88 632 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 RIPK3Q9Y572 518 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 PTCH2Q9Y6C5 1203 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 BRCA2P51587 3418 aa13.05□□□□□ -0.32
IFT43-206ENST00000554026 LOC102724159A0A0B4J2E5 919 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 B4DLN1 442 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 CPLX1O14810 134 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 CYTH3O43739 400 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 CDKL5O76039 1030 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 HMGCRP04035 888 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 CAPN2P17655 700 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 MRPL12P52815 198 aaKnown RBP13.04□□□□□ -0.32
IFT43-206ENST00000554026 AK2P54819 239 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 SNAP25P60880 206 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 AKAP17AQ02040 695 aaKnown RBP13.04□□□□□ -0.32
IFT43-206ENST00000554026 PWP2Q15269 919 aaKnown RBP13.04□□□□□ -0.32
IFT43-206ENST00000554026 MFSD14CQ5VZR4 134 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 OLFML2BQ68BL8 750 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
IFT43-206ENST00000554026 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 SRBD1Q8N5C6 995 aaKnown RBP13.04□□□□□ -0.32
IFT43-206ENST00000554026 PIGSQ96S52 555 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 MPHOSPH6Q99547 160 aaKnown RBP13.04□□□□□ -0.32
IFT43-206ENST00000554026 CPVLQ9H3G5 476 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 PCDHA1Q9Y5I3 950 aa13.04□□□□□ -0.32
IFT43-206ENST00000554026 MYH6P13533 1939 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 DNAJC25-GNG10A0A024R161 153 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 POTEB2H3BUK9 544 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 PLEKHA8P1O95397 391 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 CYP2B6P20813 491 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 CAP1Q01518 475 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 USH1GQ495M9 461 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 TRIM22Q8IYM9 498 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 ARMC5Q96C12 935 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 ZSCAN31Q96LW9 406 aaPredicted RBP13.03□□□□□ -0.32
IFT43-206ENST00000554026 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
IFT43-206ENST00000554026 BIN2Q9UBW5 565 aaPredicted RBP13.03□□□□□ -0.32
IFT43-206ENST00000554026 ADD3Q9UEY8 706 aaKnown RBP13.03□□□□□ -0.32
IFT43-206ENST00000554026 ZSWIM8A7E2V4 1837 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 DOCK3Q8IZD9 2030 aa13.03□□□□□ -0.32
IFT43-206ENST00000554026 MKI67P46013 3256 aaKnown RBP13.03□□□□□ -0.32
IFT43-206ENST00000554026 IFNAR1P17181 557 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 ADD1P35611 737 aaKnown RBP13.02□□□□□ -0.33
IFT43-206ENST00000554026 MCM2P49736 904 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 ZNF792Q3KQV3 632 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 NSMFQ6X4W1 530 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 RAB11FIP4Q86YS3 637 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.33
IFT43-206ENST00000554026 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.33
IFT43-206ENST00000554026 GLT8D2Q9H1C3 349 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 A1CFQ9NQ94 594 aaKnown RBP13.02□□□□□ -0.33
IFT43-206ENST00000554026 CYP39A1Q9NYL5 469 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 NRBP1Q9UHY1 535 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 LIMCH1Q9UPQ0 1083 aa13.02□□□□□ -0.33
IFT43-206ENST00000554026 ZNFX1Q9P2E3 1918 aaKnown RBP13.01□□□□□ -0.33
IFT43-206ENST00000554026 PTPDC1A2A3K4 754 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 ASB14A6NK59 587 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 PFKFB2O60825 505 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 CDC27P30260 824 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 GHRHRQ02643 423 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 FUT2Q10981 343 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 MUM1L1Q5H9M0 696 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
IFT43-206ENST00000554026 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 DNERQ8NFT8 737 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 CLEC4DQ8WXI8 215 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 CUL5Q93034 780 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 MAML3Q96JK9 1138 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 KIF2CQ99661 725 aa13.01□□□□□ -0.33
IFT43-206ENST00000554026 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
IFT43-206ENST00000554026 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms