RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 C1QTNF8P60827 252 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 ETF1P62495 437 aaKnown RBP4.61□□□□□ -1.67
SLIRP-202ENST00000553981 DDB1Q16531 1140 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 WIPI1Q5MNZ9 446 aaPredicted RBP4.61□□□□□ -1.67
SLIRP-202ENST00000553981 ALG1LQ6GMV1 187 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 LETMD1Q6P1Q0 360 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 LCNL1Q6ZST4 164 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 SMIM5Q71RC9 77 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 AMIGO3Q86WK7 504 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 LRRC56Q8IYG6 542 aaPredicted RBP4.61□□□□□ -1.67
SLIRP-202ENST00000553981 NLGN2Q8NFZ4 835 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 ALPK1Q96QP1 1244 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 C12orf49Q9H741 205 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 FAM8A1Q9UBU6 413 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 SNCAIPQ9Y6H5 919 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 CHD4Q14839 1912 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 TTC21BQ7Z4L5 1316 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 WDR17Q8IZU2 1322 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 CPSF1Q10570 1443 aaKnown RBP4.61□□□□□ -1.67
SLIRP-202ENST00000553981 TRPM1Q7Z4N2 1603 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 NHSQ6T4R5 1651 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 QRICH2Q9H0J4 1663 aa4.61□□□□□ -1.67
SLIRP-202ENST00000553981 KIAA1210Q9ULL0 1709 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 UTRNP46939 3433 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 CBX7O95931 251 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 USP17L7P0C7H9 530 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 PRAMEF13Q5VWM6 474 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 TOM1L2Q6ZVM7 507 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 SV2BQ7L1I2 683 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 THAP5Q7Z6K1 395 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 HID1Q8IV36 788 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 FBXO15Q8NCQ5 510 aaPredicted RBP4.6□□□□□ -1.67
SLIRP-202ENST00000553981 ZSCAN18Q8TBC5 510 aaPredicted RBP4.6□□□□□ -1.67
SLIRP-202ENST00000553981 UBE2FQ969M7 185 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 DIRC2Q96SL1 478 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 NSUN3Q9H649 340 aaKnown RBP4.6□□□□□ -1.67
SLIRP-202ENST00000553981 PPP1R1BQ9UD71 204 aaPredicted RBP4.6□□□□□ -1.67
SLIRP-202ENST00000553981 NSD2O96028 1365 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 RGPD2P0DJD1 1756 aa4.6□□□□□ -1.67
SLIRP-202ENST00000553981 BRD1O95696 1058 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 CST3P01034 146 aaPredicted RBP4.59□□□□□ -1.67
SLIRP-202ENST00000553981 GRK4P32298 578 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 ADAMTS20P59510 1910 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 TNK2Q07912 1038 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 EIF3AQ14152 1382 aaKnown RBP4.59□□□□□ -1.67
SLIRP-202ENST00000553981 TNS2Q63HR2 1409 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 ZNF746Q6NUN9 644 aaPredicted RBP4.59□□□□□ -1.67
SLIRP-202ENST00000553981 PNPLA7Q6ZV29 1317 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 SIAH1Q8IUQ4 282 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 ZSCAN29Q8IWY8 852 aaPredicted RBP4.59□□□□□ -1.67
SLIRP-202ENST00000553981 XAGE3Q8WTP9 111 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 CCDC120Q96HB5 630 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 ASB16Q96NS5 453 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 SIN3AQ96ST3 1273 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 KCNK12Q9HB15 430 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 ZSWIM5Q9P217 1185 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 SPG7Q9UQ90 795 aa4.59□□□□□ -1.67
SLIRP-202ENST00000553981 MON2Q7Z3U7 1717 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 USP54Q70EL1 1684 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 FAM208AQ9UK61 1670 aaKnown RBP4.58□□□□□ -1.68
SLIRP-202ENST00000553981 CENPJQ9HC77 1338 aaPredicted RBP4.58□□□□□ -1.68
SLIRP-202ENST00000553981 DNAJC25-GNG10A0A024R161 153 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 NFIBO00712 420 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 ZSCAN22P10073 491 aaPredicted RBP4.58□□□□□ -1.68
SLIRP-202ENST00000553981 CYP7A1P22680 504 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 KIR3DL1P43629 444 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 ATP2B2Q01814 1243 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 RALGPS1Q5JS13 557 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 TTBK2Q6IQ55 1244 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 TTC6Q86TZ1 520 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 CDH24Q86UP0 819 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 NME9Q86XW9 330 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 COX4I2Q96KJ9 171 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 MTFR1LQ9H019 292 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 SLAMF8Q9P0V8 285 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 TTF2Q9UNY4 1162 aaKnown RBP4.58□□□□□ -1.68
SLIRP-202ENST00000553981 LTN1O94822 1766 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 LY75O60449 1722 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 QSER1Q2KHR3 1735 aa4.58□□□□□ -1.68
SLIRP-202ENST00000553981 ABCC6O95255 1503 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 USP31Q70CQ4 1352 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 MAP3K5Q99683 1374 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 SBNO2Q9Y2G9 1366 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 GFRA2O00451 464 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 ESR1P03372 595 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 ERVFC1P60507 584 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 ABHD4Q8TB40 342 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 DPH2Q9BQC3 489 aaPredicted RBP4.57□□□□□ -1.68
SLIRP-202ENST00000553981 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 DCP1AQ9NPI6 582 aaPredicted RBP4.57□□□□□ -1.68
SLIRP-202ENST00000553981 STK32BQ9NY57 414 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 TMEM59LQ9UK28 342 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 PCDHB5Q9Y5E4 795 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 TOGARAM1Q9Y4F4 1720 aa4.57□□□□□ -1.68
SLIRP-202ENST00000553981 DOT1LQ8TEK3 1739 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 WASH4PA8MWX3 477 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 NPIPB6E9PJ23 425 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 EXOC5O00471 708 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 P4HBP07237 508 aaKnown RBP4.56□□□□□ -1.68
SLIRP-202ENST00000553981 RAC2P15153 192 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms