RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CCT2P78371 535 aaKnown RBP16.03■□□□□ 0.16
TUBB3-202ENST00000553656 STK3Q13188 491 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 IRF5Q13568 498 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 MORN1Q5T089 497 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 COL13A1Q5TAT6 717 aaPredicted RBP16.03■□□□□ 0.16
TUBB3-202ENST00000553656 MTMR8Q96EF0 704 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 APBA2Q99767 749 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 MCOLN1Q9GZU1 580 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 GJD2Q9UKL4 321 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 HPS5Q9UPZ3 1129 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 MRPL11Q9Y3B7 192 aaKnown RBP16.03■□□□□ 0.16
TUBB3-202ENST00000553656 PTCH2Q9Y6C5 1203 aa16.03■□□□□ 0.16
TUBB3-202ENST00000553656 PFASO15067 1338 aa16.02■□□□□ 0.16
TUBB3-202ENST00000553656 TAL1P17542 331 aaPredicted RBP16.02■□□□□ 0.16
TUBB3-202ENST00000553656 CDC27P30260 824 aa16.02■□□□□ 0.16
TUBB3-202ENST00000553656 ADD1P35611 737 aaKnown RBP16.02■□□□□ 0.16
TUBB3-202ENST00000553656 AKAP17AQ02040 695 aaKnown RBP16.02■□□□□ 0.16
TUBB3-202ENST00000553656 SLC9C1Q4G0N8 1177 aa16.02■□□□□ 0.16
TUBB3-202ENST00000553656 NSMFQ6X4W1 530 aa16.02■□□□□ 0.16
TUBB3-202ENST00000553656 TRMT44Q8IYL2 757 aaKnown RBP16.02■□□□□ 0.16
TUBB3-202ENST00000553656 SLAIN1Q8ND83 568 aa16.02■□□□□ 0.16
TUBB3-202ENST00000553656 KIF2CQ99661 725 aa16.02■□□□□ 0.16
TUBB3-202ENST00000553656 TPCN1Q9ULQ1 816 aa16.02■□□□□ 0.16
TUBB3-202ENST00000553656 PCDHA1Q9Y5I3 950 aa16.02■□□□□ 0.16
TUBB3-202ENST00000553656 ZNF236Q9UL36 1845 aa16.01■□□□□ 0.15
TUBB3-202ENST00000553656 CNTNAP5Q8WYK1 1306 aa16.01■□□□□ 0.15
TUBB3-202ENST00000553656 ADCY3O60266 1144 aa16.01■□□□□ 0.15
TUBB3-202ENST00000553656 XRCC5P13010 732 aaKnown RBP16.01■□□□□ 0.15
TUBB3-202ENST00000553656 SLC35G1Q2M3R5 365 aa16.01■□□□□ 0.15
TUBB3-202ENST00000553656 MUM1L1Q5H9M0 696 aa16.01■□□□□ 0.15
TUBB3-202ENST00000553656 MCF2L2Q86YR7 1114 aa16.01■□□□□ 0.15
TUBB3-202ENST00000553656 NCOA5Q9HCD5 579 aaKnown RBP16.01■□□□□ 0.15
TUBB3-202ENST00000553656 FAM217BQ9NTX9 383 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-202ENST00000553656 RBM27Q9P2N5 1060 aaKnown RBP16.01■□□□□ 0.15
TUBB3-202ENST00000553656 BIN2Q9UBW5 565 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-202ENST00000553656 MYH6P13533 1939 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 PTPDC1A2A3K4 754 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 CDKL5O76039 1030 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 GRK4P32298 578 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16■□□□□ 0.15
TUBB3-202ENST00000553656 HEATR3Q7Z4Q2 680 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 TNS4Q8IZW8 715 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 PXYLP1Q8TE99 480 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 USP6NLQ92738 828 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 A1CFQ9NQ94 594 aaKnown RBP16■□□□□ 0.15
TUBB3-202ENST00000553656 LIMCH1Q9UPQ0 1083 aa16■□□□□ 0.15
TUBB3-202ENST00000553656 V9GY48 417 aaPredicted RBP16■□□□□ 0.15
TUBB3-202ENST00000553656 hCG_1642624A0A1W2PR95 340 aa15.99■□□□□ 0.15
TUBB3-202ENST00000553656 POTEB2H3BUK9 544 aa15.99■□□□□ 0.15
TUBB3-202ENST00000553656 NFIBO00712 420 aa15.99■□□□□ 0.15
TUBB3-202ENST00000553656 PFKFB2O60825 505 aa15.99■□□□□ 0.15
TUBB3-202ENST00000553656 PPP1R11O60927 126 aaPredicted RBP15.99■□□□□ 0.15
TUBB3-202ENST00000553656 PGK2P07205 417 aa15.99■□□□□ 0.15
TUBB3-202ENST00000553656 HOXC6P09630 235 aa15.99■□□□□ 0.15
TUBB3-202ENST00000553656 RNF207Q6ZRF8 634 aa15.99■□□□□ 0.15
TUBB3-202ENST00000553656 CLEC4DQ8WXI8 215 aa15.99■□□□□ 0.15
TUBB3-202ENST00000553656 COBLO75128 1261 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 HMGCRP04035 888 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 ELNP15502 786 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 IFNAR1P17181 557 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 CALML3P27482 149 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 UBXN2AP68543 259 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 SSRP1Q08945 709 aaKnown RBP15.98■□□□□ 0.15
TUBB3-202ENST00000553656 FUT2Q10981 343 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 SCRN1Q12765 414 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 BAATQ14032 418 aaPredicted RBP15.98■□□□□ 0.15
TUBB3-202ENST00000553656 MFSD14CQ5VZR4 134 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 ZSCAN31Q96LW9 406 aaPredicted RBP15.98■□□□□ 0.15
TUBB3-202ENST00000553656 SLC26A6Q9BXS9 759 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 RNF26Q9BY78 433 aaPredicted RBP15.98■□□□□ 0.15
TUBB3-202ENST00000553656 MAF1Q9H063 256 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 CYP39A1Q9NYL5 469 aa15.98■□□□□ 0.15
TUBB3-202ENST00000553656 DIS3Q9Y2L1 958 aaKnown RBP15.98■□□□□ 0.15
TUBB3-202ENST00000553656 BAZ2BQ9UIF8 2168 aaKnown RBP15.97■□□□□ 0.15
TUBB3-202ENST00000553656 DOCK3Q8IZD9 2030 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 DNAJC25-GNG10A0A024R161 153 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 hCG_1984214I3L0E3 225 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 CFBP00751 764 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 MCM2P49736 904 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 ME3Q16798 604 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 ZNF713Q8N859 430 aaPredicted RBP15.97■□□□□ 0.15
TUBB3-202ENST00000553656 RGS22Q8NE09 1264 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 NPLOC4Q8TAT6 608 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 SH3TC2Q8TF17 1288 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 TRIB2Q92519 343 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 PHKBQ93100 1093 aa15.97■□□□□ 0.15
TUBB3-202ENST00000553656 SH2B1Q9NRF2 756 aaPredicted RBP15.97■□□□□ 0.15
TUBB3-202ENST00000553656 PRPF3O43395 683 aaKnown RBP15.96■□□□□ 0.15
TUBB3-202ENST00000553656 INHAP05111 366 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 SCG2P13521 617 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 NAPAP54920 295 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 RPS6P62753 249 aaKnown RBP15.96■□□□□ 0.15
TUBB3-202ENST00000553656 NTRK3Q16288 839 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 CCL14Q16627 93 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 PFKFB3Q16875 520 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-202ENST00000553656 ZNF792Q3KQV3 632 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 OLFML2BQ68BL8 750 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 SLC30A10Q6XR72 485 aa15.96■□□□□ 0.15
TUBB3-202ENST00000553656 SAMD3Q8N6K7 520 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms