RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 BRD1O95696 1058 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 F13A1P00488 732 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.61
CHD8-204ENST00000553622 GNA11P29992 359 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 NOGQ13253 232 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 TMEM132BQ14DG7 1078 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 TAF1CQ15572 869 aaPredicted RBP11.21□□□□□ -0.61
CHD8-204ENST00000553622 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 IFNL1Q8IU54 200 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 DIS3L2Q8IYB7 885 aaKnown RBP11.21□□□□□ -0.61
CHD8-204ENST00000553622 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 ANKRD13CQ8N6S4 541 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 BICD2Q8TD16 824 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 CUL5Q93034 780 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 ZIC5Q96T25 663 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 TEX13BQ9BXU2 312 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 PSTPIP2Q9H939 334 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 RNF146Q9NTX7 359 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 BTBD7Q9P203 1132 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 PNMA2Q9UL42 364 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 PCDHA4Q9UN74 947 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 ADAMTS5Q9UNA0 930 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 SLC45A1Q9Y2W3 748 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 MCM3APO60318 1980 aa11.21□□□□□ -0.62
CHD8-204ENST00000553622 KIAA1217Q5T5P2 1943 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 TESPA1A2RU30 521 aaPredicted RBP11.2□□□□□ -0.62
CHD8-204ENST00000553622 BTBD18B2RXH4 712 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 CFBP00751 764 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 STAT3P40763 770 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 MRPL12P52815 198 aaKnown RBP11.2□□□□□ -0.62
CHD8-204ENST00000553622 OAZ1P54368 228 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 INHBEP58166 350 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 NR5A1Q13285 461 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 UBE2SQ16763 222 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 JAKMIP3Q5VZ66 844 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 GALNT17Q6IS24 598 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 LBX2Q6XYB7 198 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 NCAPG2Q86XI2 1143 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 CCAR1Q8IX12 1150 aaKnown RBP11.2□□□□□ -0.62
CHD8-204ENST00000553622 REXO1Q8N1G1 1221 aaKnown RBP11.2□□□□□ -0.62
CHD8-204ENST00000553622 REPS2Q8NFH8 660 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 RASGRP4Q8TDF6 673 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 GTF3C2Q8WUA4 911 aaPredicted RBP11.2□□□□□ -0.62
CHD8-204ENST00000553622 TRERF1Q96PN7 1200 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 ZMYND12Q9H0C1 365 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 RIC8AQ9NPQ8 531 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 TMEM260Q9NX78 707 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 BIN2Q9UBW5 565 aaPredicted RBP11.2□□□□□ -0.62
CHD8-204ENST00000553622 ZDHHC9Q9Y397 364 aa11.2□□□□□ -0.62
CHD8-204ENST00000553622 LCTP09848 1927 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 CCDC194A0A1B0GVG4 234 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 ESYT2A0FGR8 921 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 KIF28PB7ZC32 967 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 ADAMTS3O15072 1205 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
CHD8-204ENST00000553622 NCLP19338 710 aaKnown RBP11.19□□□□□ -0.62
CHD8-204ENST00000553622 ATP2B1P20020 1258 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
CHD8-204ENST00000553622 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
CHD8-204ENST00000553622 RESTQ13127 1097 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 MUM1L1Q5H9M0 696 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 USP17L6PQ6QN14 398 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 NSMFQ6X4W1 530 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 FCHSD1Q86WN1 690 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 SPATC1LQ9H0A9 340 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 GLT8D2Q9H1C3 349 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 TXNRD2Q9NNW7 524 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 ZNF214Q9UL59 606 aaPredicted RBP11.19□□□□□ -0.62
CHD8-204ENST00000553622 RABGAP1Q9Y3P9 1069 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 RIPK3Q9Y572 518 aa11.19□□□□□ -0.62
CHD8-204ENST00000553622 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
CHD8-204ENST00000553622 NFIBO00712 420 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 CNMDO75829 334 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 VEGFBP49765 207 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 ERVK-9P63128 1117 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 ERVK-24P63145 666 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 CCNA1P78396 465 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 TKFCQ3LXA3 575 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 FAM173BQ6P4H8 233 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 PIK3AP1Q6ZUJ8 805 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 MCF2L2Q86YR7 1114 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 NOSTRINQ8IVI9 506 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 FAM177A1Q8N128 213 aaPredicted RBP11.18□□□□□ -0.62
CHD8-204ENST00000553622 DAGLBQ8NCG7 672 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 GPRC5AQ8NFJ5 357 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 TNPO1Q92973 898 aaKnown RBP11.18□□□□□ -0.62
CHD8-204ENST00000553622 PGBD1Q96JS3 809 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 MOV10L1Q9BXT6 1211 aaKnown RBP11.18□□□□□ -0.62
CHD8-204ENST00000553622 FOXP1Q9H334 677 aaPredicted RBP11.18□□□□□ -0.62
CHD8-204ENST00000553622 ZSCAN16Q9H4T2 348 aaPredicted RBP11.18□□□□□ -0.62
CHD8-204ENST00000553622 ACAD9Q9H845 621 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 ZFYVE28Q9HCC9 887 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 ZCCHC17Q9NP64 241 aaKnown RBP11.18□□□□□ -0.62
CHD8-204ENST00000553622 RBPJLQ9UBG7 517 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 CPA4Q9UI42 421 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 PCDHA6Q9UN73 950 aa11.18□□□□□ -0.62
CHD8-204ENST00000553622 PCDHA8Q9Y5H6 950 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms