RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 HDAC8Q9BY41 377 aa5.26□□□□□ -1.57
TDP1-207ENST00000553617 MINPP1Q9UNW1 487 aa5.26□□□□□ -1.57
TDP1-207ENST00000553617 ST14Q9Y5Y6 855 aa5.26□□□□□ -1.57
TDP1-207ENST00000553617 SHISA3A0PJX4 238 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 B4E1Z4 1266 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 C9orf172C9J069 976 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 ARVCFO00192 962 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 ARNTLO00327 626 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 AURKAO14965 403 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 LEFTY1O75610 366 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 THBDP07204 575 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 ZNF865P0CJ78 1059 aaPredicted RBP5.25□□□□□ -1.57
TDP1-207ENST00000553617 SRFP11831 508 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 BMP3P12645 472 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 FLT3P36888 993 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 IREB2P48200 963 aaKnown RBP5.25□□□□□ -1.57
TDP1-207ENST00000553617 TBX4P57082 545 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 POU4F1Q01851 419 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 NRG1Q02297 640 aaPredicted RBP5.25□□□□□ -1.57
TDP1-207ENST00000553617 ADGRE1Q14246 886 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 CFAP100Q494V2 611 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 SFRP5Q5T4F7 317 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 ABHD17CQ6PCB6 329 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 SPATS2Q86XZ4 545 aaKnown RBP5.25□□□□□ -1.57
TDP1-207ENST00000553617 KIF18BQ86Y91 864 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 FAM20CQ8IXL6 584 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 GATA6Q92908 595 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 RELTQ969Z4 430 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 TRIM8Q9BZR9 551 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 PRDM5Q9NQX1 630 aaPredicted RBP5.25□□□□□ -1.57
TDP1-207ENST00000553617 GEMIN8Q9NWZ8 242 aaKnown RBP5.25□□□□□ -1.57
TDP1-207ENST00000553617 SLC5A4Q9NY91 659 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 TCEAL9Q9UHQ7 104 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 USP21Q9UK80 565 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 KCNH3Q9ULD8 1083 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 TPX2Q9ULW0 747 aaKnown RBP5.25□□□□□ -1.57
TDP1-207ENST00000553617 PCDHA9Q9Y5H5 950 aa5.25□□□□□ -1.57
TDP1-207ENST00000553617 FAM95CA0A1B0GW59 222 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 STXBP3O00186 592 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 NEMP1O14524 444 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 TSPAN6O43657 245 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 NAT1P18440 290 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 NEK2P51955 445 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 GPR85P60893 370 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 MBTPS1Q14703 1052 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 DPY19L1Q2PZI1 675 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 CRTC3Q6UUV7 619 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 UBE2R2Q712K3 238 aaPredicted RBP5.24□□□□□ -1.57
TDP1-207ENST00000553617 PPIL6Q8IXY8 311 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 DAGLBQ8NCG7 672 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 PIWIL2Q8TC59 973 aaKnown RBP5.24□□□□□ -1.57
TDP1-207ENST00000553617 ENOX1Q8TC92 643 aaKnown RBP5.24□□□□□ -1.57
TDP1-207ENST00000553617 TSR2Q969E8 191 aaKnown RBP5.24□□□□□ -1.57
TDP1-207ENST00000553617 UTP4Q969X6 686 aaKnown RBP5.24□□□□□ -1.57
TDP1-207ENST00000553617 MEGF10Q96KG7 1140 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 NACC1Q96RE7 527 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 TTC1Q99614 292 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 PUS7LQ9H0K6 701 aaKnown RBP5.24□□□□□ -1.57
TDP1-207ENST00000553617 IFT22Q9H7X7 185 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 CRTAC1Q9NQ79 661 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 GPR27Q9NS67 375 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 BACE2Q9Y5Z0 518 aa5.24□□□□□ -1.57
TDP1-207ENST00000553617 PRR33A8MZF0 331 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 CBX4O00257 560 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 IGF2BP3O00425 579 aaKnown RBP eCLIP5.23□□□□□ -1.57
TDP1-207ENST00000553617 ZEB2O60315 1214 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 MAP4K4O95819 1239 aaPredicted RBP5.23□□□□□ -1.57
TDP1-207ENST00000553617 ID4P47928 161 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 DSG1Q02413 1049 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 TNK2Q07912 1038 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 SKOR2Q2VWA4 1001 aaPredicted RBP5.23□□□□□ -1.57
TDP1-207ENST00000553617 PIK3R6Q5UE93 754 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 E4F1Q66K89 784 aaPredicted RBP5.23□□□□□ -1.57
TDP1-207ENST00000553617 CCDC103Q8IW40 242 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 OR2W6PQ8NHA6 318 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.23□□□□□ -1.57
TDP1-207ENST00000553617 PI4K2BQ8TCG2 481 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 HEXIM2Q96MH2 286 aaKnown RBP5.23□□□□□ -1.57
TDP1-207ENST00000553617 FCRL3Q96P31 734 aaPredicted RBP5.23□□□□□ -1.57
TDP1-207ENST00000553617 PHF20Q9BVI0 1012 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 SLC12A9Q9BXP2 914 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 GPR62Q9BZJ7 368 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 GABBR1Q9UBS5 961 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 TMEFF2Q9UIK5 374 aaPredicted RBP5.23□□□□□ -1.57
TDP1-207ENST00000553617 RNF112Q9ULX5 631 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 APOBEC2Q9Y235 224 aaKnown RBP5.23□□□□□ -1.57
TDP1-207ENST00000553617 CAPN6Q9Y6Q1 641 aa5.23□□□□□ -1.57
TDP1-207ENST00000553617 SHTN1A0MZ66 631 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 C2orf71A6NGG8 1288 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 MEIS1O00470 390 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 WNT9AO14904 365 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 MEFVO15553 781 aaPredicted RBP5.22□□□□□ -1.57
TDP1-207ENST00000553617 GLRX3O76003 335 aaKnown RBP5.22□□□□□ -1.57
TDP1-207ENST00000553617 F2P00734 622 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 CKMP06732 381 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 CD3EP07766 207 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 FAM87AP0C7U9 286 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 IFNGR1P15260 489 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 RXRBP28702 533 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 BMP8BP34820 402 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms