RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 ANTXR2P58335 489 aa27.53■■■□□ 2
TDP1-205ENST00000553527 BAATQ14032 418 aaPredicted RBP27.53■■■□□ 2
TDP1-205ENST00000553527 CDC37Q16543 378 aaPredicted RBP27.53■■■□□ 2
TDP1-205ENST00000553527 CCDC144CPQ8IYA2 1237 aa27.53■■■□□ 2
TDP1-205ENST00000553527 ARRDC4Q8NCT1 418 aa27.53■■■□□ 2
TDP1-205ENST00000553527 SENP6Q9GZR1 1112 aaPredicted RBP27.53■■■□□ 2
TDP1-205ENST00000553527 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.53■■■□□ 2
TDP1-205ENST00000553527 BAZ2BQ9UIF8 2168 aaKnown RBP27.52■■■□□ 2
TDP1-205ENST00000553527 RARBP10826 455 aa27.52■■■□□ 2
TDP1-205ENST00000553527 ARMCX2Q7L311 632 aa27.52■■■□□ 2
TDP1-205ENST00000553527 LENG1Q96BZ8 264 aaPredicted RBP27.52■■■□□ 2
TDP1-205ENST00000553527 NR2E3Q9Y5X4 410 aa27.52■■■□□ 2
TDP1-205ENST00000553527 DDX49Q9Y6V7 483 aaKnown RBP27.52■■■□□ 2
TDP1-205ENST00000553527 KLRF2D3W0D1 207 aa27.51■■□□□ 1.99
TDP1-205ENST00000553527 PRC1O43663 620 aa27.51■■□□□ 1.99
TDP1-205ENST00000553527 CALML3P27482 149 aa27.51■■□□□ 1.99
TDP1-205ENST00000553527 ACVR2BQ13705 512 aa27.51■■□□□ 1.99
TDP1-205ENST00000553527 IGDCC4Q8TDY8 1250 aa27.51■■□□□ 1.99
TDP1-205ENST00000553527 GPHNQ9NQX3 736 aaPredicted RBP27.51■■□□□ 1.99
TDP1-205ENST00000553527 LCTP09848 1927 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 AKR1A1P14550 325 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 NUP133Q8WUM0 1156 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 CLEC4DQ8WXI8 215 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 ABHD16BQ9H3Z7 469 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 JMJD4Q9H9V9 463 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 XPNPEP3Q9NQH7 507 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 MAD2L2Q9UI95 211 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 PNMA2Q9UL42 364 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 FAM184BQ9ULE4 1060 aa27.5■■□□□ 1.99
TDP1-205ENST00000553527 DNAH12Q6ZR08 3092 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 KBTBD13C9JR72 458 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 DNM1LO00429 736 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 PGK1P00558 417 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 MCM5P33992 734 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 COL9A3Q14050 684 aaPredicted RBP27.49■■□□□ 1.99
TDP1-205ENST00000553527 QRICH1Q2TAL8 776 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 RNF20Q5VTR2 975 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 RNF207Q6ZRF8 634 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 CATIPQ7Z7H3 387 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 C7orf61Q8IZ16 206 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 CEP290O15078 2479 aa27.49■■□□□ 1.99
TDP1-205ENST00000553527 WDR19Q8NEZ3 1342 aa27.48■■□□□ 1.99
TDP1-205ENST00000553527 ASB14A6NK59 587 aa27.48■■□□□ 1.99
TDP1-205ENST00000553527 COL6A1P12109 1028 aa27.48■■□□□ 1.99
TDP1-205ENST00000553527 SLC30A10Q6XR72 485 aa27.48■■□□□ 1.99
TDP1-205ENST00000553527 NFXL1Q6ZNB6 911 aa27.48■■□□□ 1.99
TDP1-205ENST00000553527 EEPD1Q7L9B9 569 aa27.48■■□□□ 1.99
TDP1-205ENST00000553527 ASTN1O14525 1302 aa27.47■■□□□ 1.99
TDP1-205ENST00000553527 PALM3A6NDB9 673 aaPredicted RBP27.47■■□□□ 1.99
TDP1-205ENST00000553527 ATN1P54259 1190 aaPredicted RBP27.47■■□□□ 1.99
TDP1-205ENST00000553527 GRM4Q14833 912 aa27.47■■□□□ 1.99
TDP1-205ENST00000553527 LRRC41Q15345 812 aa27.47■■□□□ 1.99
TDP1-205ENST00000553527 CCDC144BQ3MJ40 725 aa27.47■■□□□ 1.99
TDP1-205ENST00000553527 FBXO11Q86XK2 927 aa27.47■■□□□ 1.99
TDP1-205ENST00000553527 LRRC2Q9BYS8 371 aa27.47■■□□□ 1.99
TDP1-205ENST00000553527 LY9Q9HBG7 655 aa27.47■■□□□ 1.99
TDP1-205ENST00000553527 FERMT2Q96AC1 680 aa27.46■■□□□ 1.99
TDP1-205ENST00000553527 MYL10Q9BUA6 226 aa27.46■■□□□ 1.99
TDP1-205ENST00000553527 RPS6P62753 249 aaKnown RBP27.45■■□□□ 1.98
TDP1-205ENST00000553527 TROAPQ12815 778 aa27.45■■□□□ 1.98
TDP1-205ENST00000553527 LRRC26Q2I0M4 334 aa27.45■■□□□ 1.98
TDP1-205ENST00000553527 HOMER1Q86YM7 354 aa27.45■■□□□ 1.98
TDP1-205ENST00000553527 TBC1D5Q92609 795 aa27.45■■□□□ 1.98
TDP1-205ENST00000553527 ABCB11O95342 1321 aa27.44■■□□□ 1.98
TDP1-205ENST00000553527 CCDC69A6NI79 296 aa27.44■■□□□ 1.98
TDP1-205ENST00000553527 REC8O95072 547 aa27.44■■□□□ 1.98
TDP1-205ENST00000553527 ADCYAP1R1P41586 468 aa27.44■■□□□ 1.98
TDP1-205ENST00000553527 NOL8Q76FK4 1167 aaKnown RBP27.44■■□□□ 1.98
TDP1-205ENST00000553527 RNF180Q86T96 592 aa27.44■■□□□ 1.98
TDP1-205ENST00000553527 ZNF654Q8IZM8 581 aa27.44■■□□□ 1.98
TDP1-205ENST00000553527 PIBF1Q8WXW3 757 aa27.44■■□□□ 1.98
TDP1-205ENST00000553527 TMEM87BQ96K49 555 aa27.44■■□□□ 1.98
TDP1-205ENST00000553527 ADD3Q9UEY8 706 aaKnown RBP27.44■■□□□ 1.98
TDP1-205ENST00000553527 ALDH5A1P51649 535 aaPredicted RBP27.43■■□□□ 1.98
TDP1-205ENST00000553527 RASEFQ8IZ41 740 aa27.43■■□□□ 1.98
TDP1-205ENST00000553527 NEK1Q96PY6 1258 aa27.43■■□□□ 1.98
TDP1-205ENST00000553527 ZMYND8Q9ULU4 1186 aaPredicted RBP27.43■■□□□ 1.98
TDP1-205ENST00000553527 SH2B2O14492 632 aaPredicted RBP27.42■■□□□ 1.98
TDP1-205ENST00000553527 ADCY6O43306 1168 aa27.42■■□□□ 1.98
TDP1-205ENST00000553527 RAB11FIP4Q86YS3 637 aa27.42■■□□□ 1.98
TDP1-205ENST00000553527 FBXO16Q8IX29 292 aaPredicted RBP27.42■■□□□ 1.98
TDP1-205ENST00000553527 PIGSQ96S52 555 aa27.42■■□□□ 1.98
TDP1-205ENST00000553527 AMNQ9BXJ7 453 aa27.42■■□□□ 1.98
TDP1-205ENST00000553527 KATNBL1Q9H079 304 aa27.42■■□□□ 1.98
TDP1-205ENST00000553527 PDGFCQ9NRA1 345 aa27.42■■□□□ 1.98
TDP1-205ENST00000553527 MRPL11Q9Y3B7 192 aaKnown RBP27.42■■□□□ 1.98
TDP1-205ENST00000553527 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.41■■□□□ 1.98
TDP1-205ENST00000553527 ZBTB5O15062 677 aa27.41■■□□□ 1.98
TDP1-205ENST00000553527 DUSP11O75319 330 aaKnown RBP27.41■■□□□ 1.98
TDP1-205ENST00000553527 SYN1P17600 705 aa27.41■■□□□ 1.98
TDP1-205ENST00000553527 RXRAP19793 462 aa27.41■■□□□ 1.98
TDP1-205ENST00000553527 IRX5P78411 483 aaPredicted RBP27.41■■□□□ 1.98
TDP1-205ENST00000553527 ADCK5Q3MIX3 580 aa27.41■■□□□ 1.98
TDP1-205ENST00000553527 TMTC2Q8N394 836 aa27.41■■□□□ 1.98
TDP1-205ENST00000553527 CTCFLQ8NI51 663 aaPredicted RBP27.41■■□□□ 1.98
TDP1-205ENST00000553527 TCEANC2Q96MN5 208 aa27.41■■□□□ 1.98
TDP1-205ENST00000553527 SYNRGQ9UMZ2 1314 aa27.41■■□□□ 1.98
TDP1-205ENST00000553527 TNFAIP2Q03169 654 aa27.4■■□□□ 1.98
TDP1-205ENST00000553527 SLC35G1Q2M3R5 365 aa27.4■■□□□ 1.98
TDP1-205ENST00000553527 CHRDL2Q6WN34 429 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms