RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ADAMTS4O75173 837 aa15.16■□□□□ 0.02
ACTN1-207ENST00000553290 CYP21A2P08686 494 aa15.16■□□□□ 0.02
ACTN1-207ENST00000553290 MAGEA10P43363 369 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-207ENST00000553290 SNX17Q15036 470 aa15.16■□□□□ 0.02
ACTN1-207ENST00000553290 IFIT1BQ5T764 474 aaKnown RBP15.16■□□□□ 0.02
ACTN1-207ENST00000553290 CENPQQ7L2Z9 268 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-207ENST00000553290 FERMT2Q96AC1 680 aa15.16■□□□□ 0.02
ACTN1-207ENST00000553290 LENG1Q96BZ8 264 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-207ENST00000553290 KATNBL1Q9H079 304 aa15.16■□□□□ 0.02
ACTN1-207ENST00000553290 SPC25Q9HBM1 224 aa15.16■□□□□ 0.02
ACTN1-207ENST00000553290 ADD3Q9UEY8 706 aaKnown RBP15.16■□□□□ 0.02
ACTN1-207ENST00000553290 PRKAG2Q9UGJ0 569 aa15.16■□□□□ 0.02
ACTN1-207ENST00000553290 ATP11BQ9Y2G3 1177 aa15.16■□□□□ 0.02
ACTN1-207ENST00000553290 LOC102724159A0A0B4J2E5 919 aa15.15■□□□□ 0.02
ACTN1-207ENST00000553290 A0A1W2PQ45 241 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-207ENST00000553290 A0A1W2PQY0 241 aa15.15■□□□□ 0.02
ACTN1-207ENST00000553290 PTPDC1A2A3K4 754 aa15.15■□□□□ 0.02
ACTN1-207ENST00000553290 NFIBO00712 420 aa15.15■□□□□ 0.02
ACTN1-207ENST00000553290 PARP1P09874 1014 aaKnown RBP15.15■□□□□ 0.02
ACTN1-207ENST00000553290 BAATQ14032 418 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-207ENST00000553290 PWP2Q15269 919 aaKnown RBP15.15■□□□□ 0.02
ACTN1-207ENST00000553290 KLHDC9Q8NEP7 349 aa15.15■□□□□ 0.02
ACTN1-207ENST00000553290 NUP133Q8WUM0 1156 aa15.15■□□□□ 0.02
ACTN1-207ENST00000553290 UBA5Q9GZZ9 404 aa15.15■□□□□ 0.02
ACTN1-207ENST00000553290 MOXD2PA6NHM9 499 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 CST5P28325 142 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-207ENST00000553290 GJA9P57773 515 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 SEC23AQ15436 765 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 RNF207Q6ZRF8 634 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 KIAA1211Q6ZU35 1233 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 RALYLQ86SE5 291 aaKnown RBP15.14■□□□□ 0.01
ACTN1-207ENST00000553290 PCSK9Q8NBP7 692 aaKnown RBP15.14■□□□□ 0.01
ACTN1-207ENST00000553290 NCOA7Q8NI08 942 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 MORC4Q8TE76 937 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 CLEC4DQ8WXI8 215 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 MAP4K1Q92918 833 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 LBHD1Q9BQE6 289 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-207ENST00000553290 MAF1Q9H063 256 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 UPF3AQ9H1J1 476 aaKnown RBP15.14■□□□□ 0.01
ACTN1-207ENST00000553290 ASTN1O14525 1302 aa15.14■□□□□ 0.01
ACTN1-207ENST00000553290 LCTP09848 1927 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 ERICH2A1L162 156 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 ADCY6O43306 1168 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 C6orf222P0C671 652 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-207ENST00000553290 ACLYP53396 1101 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 TNFAIP2Q03169 654 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 KCNA10Q16322 511 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 CDC37Q16543 378 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-207ENST00000553290 TRIM60Q495X7 471 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 CCSAPQ6IQ19 270 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-207ENST00000553290 ADGRF4Q8IZF3 695 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 RGS22Q8NE09 1264 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 MPHOSPH6Q99547 160 aaKnown RBP15.13■□□□□ 0.01
ACTN1-207ENST00000553290 UBE2OQ9C0C9 1292 aaKnown RBP15.13■□□□□ 0.01
ACTN1-207ENST00000553290 CPVLQ9H3G5 476 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 VTA1Q9NP79 307 aa15.13■□□□□ 0.01
ACTN1-207ENST00000553290 E7EWF7 191 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 DHX16O60231 1041 aaKnown RBP15.12■□□□□ 0.01
ACTN1-207ENST00000553290 CALML3P27482 149 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 ALDH5A1P51649 535 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-207ENST00000553290 RPS6P62753 249 aaKnown RBP15.12■□□□□ 0.01
ACTN1-207ENST00000553290 NKX3-2P78367 333 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 MDM2Q00987 491 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-207ENST00000553290 SART3Q15020 963 aaKnown RBP15.12■□□□□ 0.01
ACTN1-207ENST00000553290 USH1GQ495M9 461 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 IQSEC1Q6DN90 963 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
ACTN1-207ENST00000553290 TDHQ8IZJ6 230 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 DNERQ8NFT8 737 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 PURBQ96QR8 312 aaKnown RBP15.12■□□□□ 0.01
ACTN1-207ENST00000553290 STARD7Q9NQZ5 370 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 RBM8AQ9Y5S9 174 aaKnown RBP15.12■□□□□ 0.01
ACTN1-207ENST00000553290 ABCB11O95342 1321 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 LRRC37A2A6NM11 1700 aa15.12■□□□□ 0.01
ACTN1-207ENST00000553290 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-207ENST00000553290 MYADML2A6NDP7 307 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 B4DLN1 442 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 IFIT3O14879 490 aaKnown RBP15.11■□□□□ 0.01
ACTN1-207ENST00000553290 ASGR1P07306 291 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 MRPL12P52815 198 aaKnown RBP15.11■□□□□ 0.01
ACTN1-207ENST00000553290 TLE2Q04725 743 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 BMP2KLQ5H9B9 411 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 GNASQ5JWF2 1037 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 TAPT1Q6NXT6 567 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 SLC30A10Q6XR72 485 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 GLT1D1Q96MS3 346 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 JMJD4Q9H9V9 463 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 PDLIM7Q9NR12 457 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 PCDH10Q9P2E7 1040 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 GNEQ9Y223 722 aaKnown RBP15.11■□□□□ 0.01
ACTN1-207ENST00000553290 Q9Y3F1 56 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 MYH6P13533 1939 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 ELP1O95163 1332 aa15.11■□□□□ 0.01
ACTN1-207ENST00000553290 KLRF2D3W0D1 207 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 WTAPQ15007 396 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 QRICH1Q2TAL8 776 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 EEPD1Q7L9B9 569 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 TLK2Q86UE8 772 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 FBXO11Q86XK2 927 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms