RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 ANKRD1Q15327 319 aa15.23■□□□□ 0.03
CDK4-212ENST00000552388 QRICH1Q2TAL8 776 aa15.23■□□□□ 0.03
CDK4-212ENST00000552388 SRBD1Q8N5C6 995 aaKnown RBP15.23■□□□□ 0.03
CDK4-212ENST00000552388 ZNF274Q96GC6 653 aaPredicted RBP15.23■□□□□ 0.03
CDK4-212ENST00000552388 TRERF1Q96PN7 1200 aa15.23■□□□□ 0.03
CDK4-212ENST00000552388 FAM217BQ9NTX9 383 aaPredicted RBP15.23■□□□□ 0.03
CDK4-212ENST00000552388 FBXO40Q9UH90 709 aa15.23■□□□□ 0.03
CDK4-212ENST00000552388 NAP1L2Q9ULW6 460 aaPredicted RBP15.23■□□□□ 0.03
CDK4-212ENST00000552388 CCDC196A0A1B0GTZ2 297 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 ZBTB5O15062 677 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 ALAS1P13196 640 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 CDC27P30260 824 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 SLC4A3P48751 1232 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 AK2P54819 239 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 MAP2K5Q13163 448 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 CMTR1Q8N1G2 835 aaKnown RBP15.22■□□□□ 0.03
CDK4-212ENST00000552388 PIGSQ96S52 555 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 ACAD9Q9H845 621 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 RNF146Q9NTX7 359 aa15.22■□□□□ 0.03
CDK4-212ENST00000552388 PNMA6FA0A0J9YX94 578 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 HOXC6P09630 235 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 XRCC5P13010 732 aaKnown RBP15.21■□□□□ 0.03
CDK4-212ENST00000552388 TAL1P17542 331 aaPredicted RBP15.21■□□□□ 0.03
CDK4-212ENST00000552388 ADORA2AP29274 412 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 RGS2P41220 211 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 FUT2Q10981 343 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 KCTD2Q14681 263 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 FBXO11Q86XK2 927 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 HOMER1Q86YM7 354 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 IL27Q8NEV9 243 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 RAET1EQ8TD07 263 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 PXYLP1Q8TE99 480 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 MMP19Q99542 508 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 AMNQ9BXJ7 453 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 HOMER2Q9NSB8 354 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 MCM3APO60318 1980 aa15.21■□□□□ 0.03
CDK4-212ENST00000552388 ABCB11O95342 1321 aa15.2■□□□□ 0.02
CDK4-212ENST00000552388 CNTNAP5Q8WYK1 1306 aa15.2■□□□□ 0.02
CDK4-212ENST00000552388 PPP1R11O60927 126 aaPredicted RBP15.2■□□□□ 0.02
CDK4-212ENST00000552388 CYP2B6P20813 491 aa15.2■□□□□ 0.02
CDK4-212ENST00000552388 ADD1P35611 737 aaKnown RBP15.2■□□□□ 0.02
CDK4-212ENST00000552388 RABEP1Q15276 862 aa15.2■□□□□ 0.02
CDK4-212ENST00000552388 SLC9C1Q4G0N8 1177 aa15.2■□□□□ 0.02
CDK4-212ENST00000552388 MUM1L1Q5H9M0 696 aa15.2■□□□□ 0.02
CDK4-212ENST00000552388 SHISA4Q96DD7 197 aa15.2■□□□□ 0.02
CDK4-212ENST00000552388 RRP36Q96EU6 259 aaKnown RBP15.2■□□□□ 0.02
CDK4-212ENST00000552388 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
CDK4-212ENST00000552388 TPCN1Q9ULQ1 816 aa15.2■□□□□ 0.02
CDK4-212ENST00000552388 DNAJC25-GNG10A0A024R161 153 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 COBLO75128 1261 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 CCT2P78371 535 aaKnown RBP15.19■□□□□ 0.02
CDK4-212ENST00000552388 TRAF1Q13077 416 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 NTRK3Q16288 839 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 USH1GQ495M9 461 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 UBE2Q1Q7Z7E8 422 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 DPP9Q86TI2 863 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 ANKRD35Q8N283 1001 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 CCDC82Q8N4S0 544 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 SLAIN1Q8ND83 568 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 CLEC4DQ8WXI8 215 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 APBA2Q99767 749 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 MAF1Q9H063 256 aa15.19■□□□□ 0.02
CDK4-212ENST00000552388 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
CDK4-212ENST00000552388 PFASO15067 1338 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 NFIBO00712 420 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 ADCY3O60266 1144 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 PFKFB2O60825 505 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 GRK4P32298 578 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 ZNF792Q3KQV3 632 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
CDK4-212ENST00000552388 RGS22Q8NE09 1264 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 NPLOC4Q8TAT6 608 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 DDX11Q96FC9 970 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 TMEM106CQ9BVX2 250 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 SLC5A4Q9NY91 659 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
CDK4-212ENST00000552388 DIS3Q9Y2L1 958 aaKnown RBP15.18■□□□□ 0.02
CDK4-212ENST00000552388 MRPL11Q9Y3B7 192 aaKnown RBP15.18■□□□□ 0.02
CDK4-212ENST00000552388 PCDHA1Q9Y5I3 950 aa15.18■□□□□ 0.02
CDK4-212ENST00000552388 LRRC37A2A6NM11 1700 aa15.17■□□□□ 0.02
CDK4-212ENST00000552388 IGHA2P01877 340 aa15.17■□□□□ 0.02
CDK4-212ENST00000552388 PGK2P07205 417 aa15.17■□□□□ 0.02
CDK4-212ENST00000552388 IFNAR1P17181 557 aa15.17■□□□□ 0.02
CDK4-212ENST00000552388 ME3Q16798 604 aa15.17■□□□□ 0.02
CDK4-212ENST00000552388 FAM133AQ8N9E0 248 aa15.17■□□□□ 0.02
CDK4-212ENST00000552388 PIBF1Q8WXW3 757 aa15.17■□□□□ 0.02
CDK4-212ENST00000552388 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
CDK4-212ENST00000552388 NCOA5Q9HCD5 579 aaKnown RBP15.17■□□□□ 0.02
CDK4-212ENST00000552388 CYP39A1Q9NYL5 469 aa15.17■□□□□ 0.02
CDK4-212ENST00000552388 FRMPD3Q5JV73 1810 aa15.16■□□□□ 0.02
CDK4-212ENST00000552388 PRPF3O43395 683 aaKnown RBP15.16■□□□□ 0.02
CDK4-212ENST00000552388 ELNP15502 786 aa15.16■□□□□ 0.02
CDK4-212ENST00000552388 GHRHRQ02643 423 aa15.16■□□□□ 0.02
CDK4-212ENST00000552388 SCRN1Q12765 414 aa15.16■□□□□ 0.02
CDK4-212ENST00000552388 STK3Q13188 491 aa15.16■□□□□ 0.02
CDK4-212ENST00000552388 CCL14Q16627 93 aa15.16■□□□□ 0.02
CDK4-212ENST00000552388 OLFML2BQ68BL8 750 aa15.16■□□□□ 0.02
CDK4-212ENST00000552388 NSMFQ6X4W1 530 aa15.16■□□□□ 0.02
CDK4-212ENST00000552388 RNF207Q6ZRF8 634 aa15.16■□□□□ 0.02
CDK4-212ENST00000552388 MCF2L2Q86YR7 1114 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms