RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 GDF6Q6KF10 455 aaPredicted RBP9.73□□□□□ -0.85
BEST3-211ENST00000552295 VPS37DQ86XT2 251 aa9.73□□□□□ -0.85
BEST3-211ENST00000552295 RTKN2Q8IZC4 609 aa9.73□□□□□ -0.85
BEST3-211ENST00000552295 TDRD7Q8NHU6 1098 aaKnown RBP9.73□□□□□ -0.85
BEST3-211ENST00000552295 PSMD1Q99460 953 aa9.73□□□□□ -0.85
BEST3-211ENST00000552295 EYA3Q99504 573 aa9.73□□□□□ -0.85
BEST3-211ENST00000552295 RBSNQ9H1K0 784 aa9.73□□□□□ -0.85
BEST3-211ENST00000552295 ANTXR1Q9H6X2 564 aa9.73□□□□□ -0.85
BEST3-211ENST00000552295 SRA1Q9HD15 236 aaKnown RBP9.73□□□□□ -0.85
BEST3-211ENST00000552295 GNL3LQ9NVN8 582 aaKnown RBP9.73□□□□□ -0.85
BEST3-211ENST00000552295 SCN9AQ15858 1988 aa9.73□□□□□ -0.85
BEST3-211ENST00000552295 PDS5AQ29RF7 1337 aaKnown RBP9.73□□□□□ -0.85
BEST3-211ENST00000552295 RFX7Q2KHR2 1363 aa9.73□□□□□ -0.85
BEST3-211ENST00000552295 COL4A5P29400 1685 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 CYP2E1P05181 493 aaPredicted RBP9.72□□□□□ -0.85
BEST3-211ENST00000552295 IL1R1P14778 569 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 CHMLP26374 656 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 TMEM130Q8N3G9 435 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 IL22RA1Q8N6P7 574 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 KBTBD3Q8NAB2 608 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 SUPT20HQ8NEM7 779 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 SYT17Q9BSW7 474 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 BACH2Q9BYV9 841 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 ZC3H12CQ9C0D7 883 aaKnown RBP9.72□□□□□ -0.85
BEST3-211ENST00000552295 COA1Q9GZY4 146 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 CD209Q9NNX6 404 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 DENND2AQ9ULE3 1009 aa9.72□□□□□ -0.85
BEST3-211ENST00000552295 A6NJR5 290 aa9.71□□□□□ -0.86
BEST3-211ENST00000552295 MMP20O60882 483 aa9.71□□□□□ -0.86
BEST3-211ENST00000552295 SOX18P35713 384 aa9.71□□□□□ -0.86
BEST3-211ENST00000552295 KIAA2012Q0VF49 1180 aa9.71□□□□□ -0.86
BEST3-211ENST00000552295 TTF1Q15361 905 aaPredicted RBP9.71□□□□□ -0.86
BEST3-211ENST00000552295 MAP4K3Q8IVH8 894 aa9.71□□□□□ -0.86
BEST3-211ENST00000552295 NSUN5Q96P11 429 aaKnown RBP9.71□□□□□ -0.86
BEST3-211ENST00000552295 PIH1D3Q9NQM4 214 aaKnown RBP9.71□□□□□ -0.86
BEST3-211ENST00000552295 SBF1O95248 1867 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 DICER1Q9UPY3 1922 aaKnown RBP9.7□□□□□ -0.86
BEST3-211ENST00000552295 F8W735 103 aaPredicted RBP9.7□□□□□ -0.86
BEST3-211ENST00000552295 NFKBIEO00221 500 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 FRAT2O75474 233 aaPredicted RBP9.7□□□□□ -0.86
BEST3-211ENST00000552295 ALX3O95076 343 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 FSTP19883 344 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 AOC3Q16853 763 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 ERICH6Q7L0X2 663 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 TICAM2Q86XR7 235 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 KRTAP1-3Q8IUG1 177 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 LTBP3Q9NS15 1303 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 SALL1Q9NSC2 1324 aa9.7□□□□□ -0.86
BEST3-211ENST00000552295 HIP1O00291 1037 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 PPIP5K2O43314 1243 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 CHGBP05060 677 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 HOXD8P13378 290 aaPredicted RBP9.69□□□□□ -0.86
BEST3-211ENST00000552295 CHAF1AQ13111 956 aaPredicted RBP9.69□□□□□ -0.86
BEST3-211ENST00000552295 COX20Q5RI15 118 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 CASC1Q6TDU7 716 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 FAM205AQ6ZU69 1335 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 VPS33BQ9H267 617 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 IL25Q9H293 177 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 TAOK3Q9H2K8 898 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 DBNDD1Q9H9R9 158 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 ZNF277Q9NRM2 450 aaPredicted RBP9.69□□□□□ -0.86
BEST3-211ENST00000552295 DIAPH3Q9NSV4 1193 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 PCMTD2Q9NV79 361 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 JAG2Q9Y219 1238 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 KCNMB2Q9Y691 235 aa9.69□□□□□ -0.86
BEST3-211ENST00000552295 A0A0D9SFI3 127 aa9.68□□□□□ -0.86
BEST3-211ENST00000552295 RNF113AO15541 343 aaKnown RBP9.68□□□□□ -0.86
BEST3-211ENST00000552295 ECE2O60344 883 aa9.68□□□□□ -0.86
BEST3-211ENST00000552295 IDH1O75874 414 aaKnown RBP9.68□□□□□ -0.86
BEST3-211ENST00000552295 ZFYP08048 801 aaPredicted RBP9.68□□□□□ -0.86
BEST3-211ENST00000552295 ADD2P35612 726 aa9.68□□□□□ -0.86
BEST3-211ENST00000552295 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
BEST3-211ENST00000552295 NMIQ13287 307 aaPredicted RBP9.68□□□□□ -0.86
BEST3-211ENST00000552295 WDR66Q8TBY9 1149 aa9.68□□□□□ -0.86
BEST3-211ENST00000552295 FAM227BQ96M60 508 aa9.68□□□□□ -0.86
BEST3-211ENST00000552295 KRTAP4-12Q9BQ66 201 aa9.68□□□□□ -0.86
BEST3-211ENST00000552295 MYH2Q9UKX2 1941 aa9.68□□□□□ -0.86
BEST3-211ENST00000552295 RAD50Q92878 1312 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 TCRBV5S4A2TA0A5A2 114 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 YDJCA8MPS7 323 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 SGSM2O43147 1006 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 PDE6AP16499 860 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 YBX3P16989 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
BEST3-211ENST00000552295 RFX1P22670 979 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 PRDX5P30044 214 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 PRELPP51888 382 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 MAP3K12Q12852 859 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 SETDB1Q15047 1291 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 UBE3CQ15386 1083 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 LRRFIP1Q32MZ4 808 aaKnown RBP9.67□□□□□ -0.86
BEST3-211ENST00000552295 SLC9C2Q5TAH2 1124 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 ZSCAN25Q6NSZ9 544 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 CWC27Q6UX04 472 aaKnown RBP9.67□□□□□ -0.86
BEST3-211ENST00000552295 CACTIN-AS1Q8N1I8 211 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 ZNF384Q8TF68 577 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 RUFY2Q8WXA3 655 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.67□□□□□ -0.86
BEST3-211ENST00000552295 KCNQ5Q9NR82 932 aa9.67□□□□□ -0.86
BEST3-211ENST00000552295 LRP2BPQ9P2M1 347 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms