RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 SLC43A3Q8NBI5 491 aa16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 NEDD1Q8NHV4 660 aa16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 SLC28A3Q9HAS3 691 aa16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 A1CFQ9NQ94 594 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 LRRC37A2A6NM11 1700 aa16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 IGFBP4P22692 258 aa16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 SLC1A4P43007 532 aa16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 ITGA7Q13683 1181 aa16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 IL27Q8NEV9 243 aa16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 STAG1Q8WVM7 1258 aa16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 GMCL1Q96IK5 515 aa16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 AGBL1Q96MI9 1066 aa16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 TRERF1Q96PN7 1200 aa16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 ASB2Q96Q27 587 aa16.86■□□□□ 0.29
CHMP1A-210ENST00000551981 SOWAHBA6NEL2 793 aa16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 M0R2C6 588 aa16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 MRPS5P82675 430 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 TFAP4Q01664 338 aa16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 RPUSD2Q8IZ73 545 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 TSPYL2Q9H2G4 693 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 NKX2-4Q9H2Z4 354 aa16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 CXXC1Q9P0U4 656 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 GNEQ9Y223 722 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 ASTN1O14525 1302 aa16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 CHD7Q9P2D1 2997 aa16.85■□□□□ 0.29
CHMP1A-210ENST00000551981 DYNC1LI2O43237 492 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 ALAS1P13196 640 aa16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 CCDC85BQ15834 202 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 IQSEC1Q6DN90 963 aa16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 OTOP2Q7RTS6 562 aa16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 MIER1Q8N108 512 aa16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 NOC4LQ9BVI4 516 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 NAPBQ9H115 298 aa16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 Q9Y3F1 56 aa16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 ZNF536O15090 1300 aa16.84■□□□□ 0.29
CHMP1A-210ENST00000551981 TRANK1O15050 2925 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 PLA2G6O60733 806 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 SMPD1P17405 629 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 COL9A1P20849 921 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 MCCP23508 829 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 CCL23P55773 120 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 ADGRE1Q14246 886 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 ADAMTS19Q8TE59 1207 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 TRPV6Q9H1D0 765 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 STX8Q9UNK0 236 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 SLC4A7Q9Y6M7 1214 aa16.83■□□□□ 0.28
CHMP1A-210ENST00000551981 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
CHMP1A-210ENST00000551981 PPARAQ07869 468 aa16.82■□□□□ 0.28
CHMP1A-210ENST00000551981 FBXO16Q8IX29 292 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-210ENST00000551981 VTA1Q9NP79 307 aa16.82■□□□□ 0.28
CHMP1A-210ENST00000551981 CYP39A1Q9NYL5 469 aa16.82■□□□□ 0.28
CHMP1A-210ENST00000551981 RCAN3Q9UKA8 241 aa16.82■□□□□ 0.28
CHMP1A-210ENST00000551981 YBX2Q9Y2T7 364 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-210ENST00000551981 GRIN2DO15399 1336 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 TSPY2A6NKD2 308 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 ZBBXA8MT70 800 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 ERC2O15083 957 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 B4GALT4O60513 344 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 PPP2R2DQ66LE6 453 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 TAPT1Q6NXT6 567 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 NSMFQ6X4W1 530 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 KCTD1Q719H9 257 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 EEPD1Q7L9B9 569 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 CHMP4CQ96CF2 233 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 UHRF1Q96T88 793 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 DCTPP1Q9H773 170 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 PDGFCQ9NRA1 345 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 PCDHA11Q9Y5I1 949 aa16.81■□□□□ 0.28
CHMP1A-210ENST00000551981 TTC41PQ6P2S7 1318 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 PFKMP08237 780 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 SUPT20HL2P0C7V6 817 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 PSMC6P62333 389 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 KIAA1211Q6ZU35 1233 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 FSD1Q9BTV5 496 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 WNT8AQ9H1J5 351 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 ALDH8A1Q9H2A2 487 aaPredicted RBP16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 POLR3EQ9NVU0 708 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 ADD3Q9UEY8 706 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 PRR12Q9ULL5 1215 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 LCTP09848 1927 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 XIRP2A4UGR9 3374 aa16.8■□□□□ 0.28
CHMP1A-210ENST00000551981 ICAM1P05362 532 aa16.79■□□□□ 0.28
CHMP1A-210ENST00000551981 ATP2A2P16615 1042 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-210ENST00000551981 RABGGTBP53611 331 aa16.79■□□□□ 0.28
CHMP1A-210ENST00000551981 DUSP28Q4G0W2 176 aa16.79■□□□□ 0.28
CHMP1A-210ENST00000551981 MUM1L1Q5H9M0 696 aa16.79■□□□□ 0.28
CHMP1A-210ENST00000551981 SEC62Q99442 399 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-210ENST00000551981 DDX49Q9Y6V7 483 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-210ENST00000551981 REV3LO60673 3130 aa16.79■□□□□ 0.28
CHMP1A-210ENST00000551981 LOC102724159A0A0B4J2E5 919 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 PTGS1P23219 599 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 CPT1AP50416 773 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 SNAP25P60880 206 aa16.78■□□□□ 0.28
CHMP1A-210ENST00000551981 PWP2Q15269 919 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms