RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 HPS5Q9UPZ3 1129 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 TNRC18O15417 2968 aaPredicted RBP18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 CCDC196A0A1B0GTZ2 297 aa18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 ADCY3O60266 1144 aa18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 CDC27P30260 824 aa18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 AK2P54819 239 aa18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 MUM1L1Q5H9M0 696 aa18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 ANKRD35Q8N283 1001 aa18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 RRP36Q96EU6 259 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 KIF2CQ99661 725 aa18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 AMNQ9BXJ7 453 aa18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 FAM217BQ9NTX9 383 aaPredicted RBP18.82■□□□□ 0.6
CHMP1A-209ENST00000550872 MYH6P13533 1939 aa18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 ZNFX1Q9P2E3 1918 aaKnown RBP18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 PNMA6FA0A0J9YX94 578 aa18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 COBLO75128 1261 aa18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 GRK4P32298 578 aa18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 ADD1P35611 737 aaKnown RBP18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 CCT2P78371 535 aaKnown RBP18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 ZNF274Q96GC6 653 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 SLC5A4Q9NY91 659 aa18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 PLXNB2O15031 1838 aa18.81■□□□□ 0.6
CHMP1A-209ENST00000550872 ABCB11O95342 1321 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 PGK2P07205 417 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 XRCC5P13010 732 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 ELNP15502 786 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 TRAF1Q13077 416 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 SLC9C1Q4G0N8 1177 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 NSMFQ6X4W1 530 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 NOL8Q76FK4 1167 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 NPLOC4Q8TAT6 608 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 PXYLP1Q8TE99 480 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 TBC1D32Q96NH3 1257 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 APBA2Q99767 749 aa18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 BIN2Q9UBW5 565 aaPredicted RBP18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 SEC63Q9UGP8 760 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-209ENST00000550872 PPP1R11O60927 126 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-209ENST00000550872 HOXC6P09630 235 aa18.79■□□□□ 0.6
CHMP1A-209ENST00000550872 STK3Q13188 491 aa18.79■□□□□ 0.6
CHMP1A-209ENST00000550872 SLAIN1Q8ND83 568 aa18.79■□□□□ 0.6
CHMP1A-209ENST00000550872 SH3TC2Q8TF17 1288 aa18.79■□□□□ 0.6
CHMP1A-209ENST00000550872 A1CFQ9NQ94 594 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-209ENST00000550872 TPCN1Q9ULQ1 816 aa18.79■□□□□ 0.6
CHMP1A-209ENST00000550872 MRPL11Q9Y3B7 192 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-209ENST00000550872 PCDHA1Q9Y5I3 950 aa18.79■□□□□ 0.6
CHMP1A-209ENST00000550872 hCG_1642624A0A1W2PR95 340 aa18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 NFIBO00712 420 aa18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 RABEP1Q15276 862 aa18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 CCL14Q16627 93 aa18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 TRMT44Q8IYL2 757 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 CLEC4DQ8WXI8 215 aa18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 SLKQ9H2G2 1235 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 NCOA5Q9HCD5 579 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 V9GY48 417 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 NID2Q14112 1375 aa18.78■□□□□ 0.6
CHMP1A-209ENST00000550872 PFASO15067 1338 aa18.77■□□□□ 0.6
CHMP1A-209ENST00000550872 CNTNAP5Q8WYK1 1306 aa18.77■□□□□ 0.6
CHMP1A-209ENST00000550872 PDE4DIPQ5VU43 2346 aa18.77■□□□□ 0.6
CHMP1A-209ENST00000550872 PTPDC1A2A3K4 754 aa18.77■□□□□ 0.6
CHMP1A-209ENST00000550872 POTEB2H3BUK9 544 aa18.77■□□□□ 0.6
CHMP1A-209ENST00000550872 FUT2Q10981 343 aa18.77■□□□□ 0.6
CHMP1A-209ENST00000550872 ZNF792Q3KQV3 632 aa18.77■□□□□ 0.6
CHMP1A-209ENST00000550872 TRIB2Q92519 343 aa18.77■□□□□ 0.6
CHMP1A-209ENST00000550872 DNAJC25-GNG10A0A024R161 153 aa18.76■□□□□ 0.59
CHMP1A-209ENST00000550872 CPLX1O14810 134 aa18.76■□□□□ 0.59
CHMP1A-209ENST00000550872 BAATQ14032 418 aaPredicted RBP18.76■□□□□ 0.59
CHMP1A-209ENST00000550872 RNF207Q6ZRF8 634 aa18.76■□□□□ 0.59
CHMP1A-209ENST00000550872 MCF2L2Q86YR7 1114 aa18.76■□□□□ 0.59
CHMP1A-209ENST00000550872 CYP39A1Q9NYL5 469 aa18.76■□□□□ 0.59
CHMP1A-209ENST00000550872 FLRT1Q9NZU1 646 aa18.76■□□□□ 0.59
CHMP1A-209ENST00000550872 DIS3Q9Y2L1 958 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-209ENST00000550872 ZNF236Q9UL36 1845 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 PFKFB2O60825 505 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 HMGCRP04035 888 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 CALML3P27482 149 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 UBXN2AP68543 259 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 CNTN2Q02246 1040 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 NTRK3Q16288 839 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 MFSD14CQ5VZR4 134 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 CPLX2Q6PUV4 134 aaKnown RBP18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 RGS22Q8NE09 1264 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 TBC1D5Q92609 795 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 ARMC5Q96C12 935 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 MAML3Q96JK9 1138 aa18.75■□□□□ 0.59
CHMP1A-209ENST00000550872 MYCP01106 439 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-209ENST00000550872 INHAP05111 366 aa18.74■□□□□ 0.59
CHMP1A-209ENST00000550872 IFNAR1P17181 557 aa18.74■□□□□ 0.59
CHMP1A-209ENST00000550872 SOX10P56693 466 aa18.74■□□□□ 0.59
CHMP1A-209ENST00000550872 RPS6P62753 249 aaKnown RBP18.74■□□□□ 0.59
CHMP1A-209ENST00000550872 AKAP17AQ02040 695 aaKnown RBP18.74■□□□□ 0.59
CHMP1A-209ENST00000550872 OLFML2BQ68BL8 750 aa18.74■□□□□ 0.59
CHMP1A-209ENST00000550872 FAM133AQ8N9E0 248 aa18.74■□□□□ 0.59
CHMP1A-209ENST00000550872 LIMCH1Q9UPQ0 1083 aa18.74■□□□□ 0.59
CHMP1A-209ENST00000550872 PRPF3O43395 683 aaKnown RBP18.73■□□□□ 0.59
CHMP1A-209ENST00000550872 PPFIA3O75145 1194 aa18.73■□□□□ 0.59
CHMP1A-209ENST00000550872 CFBP00751 764 aa18.73■□□□□ 0.59
CHMP1A-209ENST00000550872 CYP2C19P33261 490 aa18.73■□□□□ 0.59
CHMP1A-209ENST00000550872 SCRN1Q12765 414 aa18.73■□□□□ 0.59
CHMP1A-209ENST00000550872 TRIM32Q13049 653 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms