RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SLC26A6Q9BXS9 759 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 MROH8Q9H579 483 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 SH2B1Q9NRF2 756 aaPredicted RBP15.1■□□□□ 0.01
RAB5C-206ENST00000550406 HOMER2Q9NSB8 354 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 RNF146Q9NTX7 359 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 GABRQQ9UN88 632 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 NFIBO00712 420 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 JAK2O60674 1132 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 PTPREP23469 700 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 MCM2P49736 904 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 SSRP1Q08945 709 aaKnown RBP15.09■□□□□ 0.01
RAB5C-206ENST00000550406 TKFCQ3LXA3 575 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 MORN1Q5T089 497 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 WWC2Q6AWC2 1192 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 TYW1BQ6NUM6 668 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 PLEKHH3Q7Z736 793 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 CHST13Q8NET6 341 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 USP6NLQ92738 828 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 ERO1AQ96HE7 468 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 RNF26Q9BY78 433 aaPredicted RBP15.09■□□□□ 0.01
RAB5C-206ENST00000550406 PCDHA1Q9Y5I3 950 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 ABCB11O95342 1321 aa15.09■□□□□ 0.01
RAB5C-206ENST00000550406 TNPO2O14787 897 aaKnown RBP15.08■□□□□ 0
RAB5C-206ENST00000550406 CPLX1O14810 134 aa15.08■□□□□ 0
RAB5C-206ENST00000550406 COPB2P35606 906 aa15.08■□□□□ 0
RAB5C-206ENST00000550406 FCGRTP55899 365 aa15.08■□□□□ 0
RAB5C-206ENST00000550406 PFKFB3Q16875 520 aaPredicted RBP15.08■□□□□ 0
RAB5C-206ENST00000550406 WDR78Q5VTH9 848 aa15.08■□□□□ 0
RAB5C-206ENST00000550406 OTOP1Q7RTM1 612 aa15.08■□□□□ 0
RAB5C-206ENST00000550406 SMARCC2Q8TAQ2 1214 aa15.08■□□□□ 0
RAB5C-206ENST00000550406 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 0
RAB5C-206ENST00000550406 AIFM3Q96NN9 605 aa15.08■□□□□ 0
RAB5C-206ENST00000550406 ACAD9Q9H845 621 aa15.08■□□□□ 0
RAB5C-206ENST00000550406 MCM3APO60318 1980 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 SLC15A5A6NIM6 579 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 STXBP3O00186 592 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 COBLO75128 1261 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 SCG2P13521 617 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 CUL4AQ13619 759 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 GRB14Q14449 540 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 KIF22Q14807 665 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 A1CFQ9NQ94 594 aaKnown RBP15.07■□□□□ 0
RAB5C-206ENST00000550406 SEC63Q9UGP8 760 aaKnown RBP15.07■□□□□ 0
RAB5C-206ENST00000550406 PNMA2Q9UL42 364 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 MRPL11Q9Y3B7 192 aaKnown RBP15.07■□□□□ 0
RAB5C-206ENST00000550406 STK36Q9NRP7 1315 aa15.07■□□□□ 0
RAB5C-206ENST00000550406 DNAJC25-GNG10A0A024R161 153 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 PTPDC1A2A3K4 754 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 ADAMTS3O15072 1205 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 STRNO43815 780 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 CPLX2Q6PUV4 134 aaKnown RBP15.06■□□□□ 0
RAB5C-206ENST00000550406 HEATR3Q7Z4Q2 680 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 CCAR1Q8IX12 1150 aaKnown RBP15.06■□□□□ 0
RAB5C-206ENST00000550406 ABRAQ8N0Z2 381 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 DDX11Q96FC9 970 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 PURBQ96QR8 312 aaKnown RBP15.06■□□□□ 0
RAB5C-206ENST00000550406 MMP19Q99542 508 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 LLPHQ9BRT6 129 aaKnown RBP15.06■□□□□ 0
RAB5C-206ENST00000550406 ORC3Q9UBD5 711 aaPredicted RBP15.06■□□□□ 0
RAB5C-206ENST00000550406 SRRDQ9UH36 339 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 FBXO40Q9UH90 709 aa15.06■□□□□ 0
RAB5C-206ENST00000550406 K7ELQ4 463 aaPredicted RBP15.05■□□□□ -0
RAB5C-206ENST00000550406 CDKL5O76039 1030 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 DEXIO95424 95 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 PGK2P07205 417 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 FCER1AP12319 257 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 ADORA2AP29274 412 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 FLT3LGP49771 235 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 GHRHRQ02643 423 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 PRKCZQ05513 592 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 BAATQ14032 418 aaPredicted RBP15.05■□□□□ -0
RAB5C-206ENST00000550406 RGS22Q8NE09 1264 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 NPLOC4Q8TAT6 608 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 FGD4Q96M96 766 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 PRDM10Q9NQV6 1147 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 BARHL2Q9NY43 387 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 CYP39A1Q9NYL5 469 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 COL20A1Q9P218 1284 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 RBM27Q9P2N5 1060 aaKnown RBP15.05■□□□□ -0
RAB5C-206ENST00000550406 TRIM17Q9Y577 477 aa15.05■□□□□ -0
RAB5C-206ENST00000550406 ASTN1O14525 1302 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 GNRH1P01148 92 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 HSD17B4P51659 736 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 AKAP17AQ02040 695 aaKnown RBP15.04■□□□□ -0
RAB5C-206ENST00000550406 CNTN2Q02246 1040 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 MAP2K5Q13163 448 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 ZNF792Q3KQV3 632 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 NSMFQ6X4W1 530 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 SLC30A10Q6XR72 485 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 TRIM22Q8IYM9 498 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 ANKRD35Q8N283 1001 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 FAM133AQ8N9E0 248 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 NUDT12Q9BQG2 462 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 GJB4Q9NTQ9 266 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 VPS54Q9P1Q0 977 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 IVNS1ABPQ9Y6Y0 642 aa15.04■□□□□ -0
RAB5C-206ENST00000550406 SOWAHBA6NEL2 793 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 hCG_1984214I3L0E3 225 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 MEIS2O14770 477 aa15.03■□□□□ -0
RAB5C-206ENST00000550406 IGHA2P01877 340 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms