RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 DDIT3P35638 169 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 NLRP5P59047 1200 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 CCNA1P78396 465 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 GUCY1B3Q02153 619 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 MAP2K1Q02750 393 aaPredicted RBP10.37□□□□□ -0.75
CACNB3-215ENST00000550190 TRIM29Q14134 588 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 RIOX2Q8IUF8 465 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 DNAJC5GQ8N7S2 189 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 MOV10L1Q9BXT6 1211 aaKnown RBP10.37□□□□□ -0.75
CACNB3-215ENST00000550190 GJB4Q9NTQ9 266 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 RNF146Q9NTX7 359 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 MORF4L1Q9UBU8 362 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 PNMA2Q9UL42 364 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 MRPL11Q9Y3B7 192 aaKnown RBP10.37□□□□□ -0.75
CACNB3-215ENST00000550190 RIPK3Q9Y572 518 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 PLXNB2O15031 1838 aa10.37□□□□□ -0.75
CACNB3-215ENST00000550190 RBBP6Q7Z6E9 1792 aaKnown RBP10.37□□□□□ -0.75
CACNB3-215ENST00000550190 ADGRA2Q96PE1 1338 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 SMCO2A6NFE2 343 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 H3BQV1 296 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 hCG_1984214I3L0E3 225 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 STXBP3O00186 592 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 ATP2A1O14983 1001 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 SLC25A27O95847 323 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 BCRP11274 1271 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 ERCC3P19447 782 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 FAM110CQ1W6H9 321 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 TKFCQ3LXA3 575 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 MUM1L1Q5H9M0 696 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 LARP1BQ659C4 914 aaKnown RBP10.36□□□□□ -0.75
CACNB3-215ENST00000550190 C17orf99Q6UX52 265 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 ZNF713Q8N859 430 aaPredicted RBP10.36□□□□□ -0.75
CACNB3-215ENST00000550190 CCDC148Q8NFR7 591 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 CCDC12Q8WUD4 166 aaPredicted RBP10.36□□□□□ -0.75
CACNB3-215ENST00000550190 C8orf76Q96K31 380 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 PORCNQ9H237 461 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 EFCC1Q9HA90 598 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 BARHL2Q9NY43 387 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 TSKSQ9UJT2 592 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 KCNJ14Q9UNX9 436 aa10.36□□□□□ -0.75
CACNB3-215ENST00000550190 CFBP00751 764 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 ADCY7P51828 1080 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 KRT40Q6A162 431 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 TYW1BQ6NUM6 668 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 NSMFQ6X4W1 530 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 CHST13Q8NET6 341 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 TBC1D5Q92609 795 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 CUL5Q93034 780 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 MROH8Q9H579 483 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 ACAD9Q9H845 621 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 C6orf50Q9HD87 102 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 SH3GLB2Q9NR46 395 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 ZSWIM8A7E2V4 1837 aa10.35□□□□□ -0.75
CACNB3-215ENST00000550190 DOCK3Q8IZD9 2030 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 VPS37CA5D8V6 355 aaPredicted RBP10.34□□□□□ -0.75
CACNB3-215ENST00000550190 GPR25O00155 361 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 NFIBO00712 420 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 CALML3P27482 149 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 COPB2P35606 906 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 MRPL12P52815 198 aaKnown RBP10.34□□□□□ -0.75
CACNB3-215ENST00000550190 SP3Q02447 781 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 GNL2Q13823 731 aaKnown RBP10.34□□□□□ -0.75
CACNB3-215ENST00000550190 KIF22Q14807 665 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 UBE2SQ16763 222 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 MCTP1Q6DN14 999 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 PPP1R18Q6NYC8 613 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 RNF207Q6ZRF8 634 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 MCF2L2Q86YR7 1114 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 ANKRD35Q8N283 1001 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 SHCBP1Q8NEM2 672 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 CLEC4DQ8WXI8 215 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 SHISA4Q96DD7 197 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 MMP19Q99542 508 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 PSTPIP2Q9H939 334 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 SAGE1Q9NXZ1 904 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 BIN2Q9UBW5 565 aaPredicted RBP10.34□□□□□ -0.75
CACNB3-215ENST00000550190 FBXO40Q9UH90 709 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 IVNS1ABPQ9Y6Y0 642 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 PLXNA1Q9UIW2 1896 aa10.34□□□□□ -0.75
CACNB3-215ENST00000550190 GCOM1H8Y6P7 765 aaPredicted RBP10.33□□□□□ -0.76
CACNB3-215ENST00000550190 TNPO2O14787 897 aaKnown RBP10.33□□□□□ -0.76
CACNB3-215ENST00000550190 OPLAHO14841 1288 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 POLR2MP0CAP2 368 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 FCER1AP12319 257 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 PDCP20941 246 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 GNA11P29992 359 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 MAPK4P31152 587 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 HOXA13P31271 388 aaPredicted RBP10.33□□□□□ -0.76
CACNB3-215ENST00000550190 KRT2P35908 639 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 BAATQ14032 418 aaPredicted RBP10.33□□□□□ -0.76
CACNB3-215ENST00000550190 KCTD2Q14681 263 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 SAFBQ15424 915 aaKnown RBP eCLIP10.33□□□□□ -0.76
CACNB3-215ENST00000550190 FOXD4L5Q5VV16 416 aaPredicted RBP10.33□□□□□ -0.76
CACNB3-215ENST00000550190 JAKMIP3Q5VZ66 844 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 USP17L6PQ6QN14 398 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 GPR142Q7Z601 462 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 PLEKHH3Q7Z736 793 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 FCHSD1Q86WN1 690 aa10.33□□□□□ -0.76
CACNB3-215ENST00000550190 BLIDQ8IZY5 108 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms