RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	JMJD4	Q9H9V9	463 aa		13.91	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	KIAA0100	Q14667	2235 aa	Known RBP	13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	SOWAHB	A6NEL2	793 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CCDC69	A6NI79	296 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	ASB14	A6NK59	587 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	EPB41L2	O43491	1005 aa	Known RBP	13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	SNAI1	O95863	264 aa	Predicted RBP	13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	AKR1A1	P14550	325 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	LIFR	P42702	1097 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	MNX1	P50219	401 aa	Predicted RBP	13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	QRICH1	Q2TAL8	776 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	PRPF38B	Q5VTL8	546 aa	Known RBP	13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	NFXL1	Q6ZNB6	911 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	ARMCX2	Q7L311	632 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CCDC144CP	Q8IYA2	1237 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	ZNF654	Q8IZM8	581 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	NEK1	Q96PY6	1258 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	MAP3K14	Q99558	947 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	C11orf49	Q9H6J7	331 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	VAT1L	Q9HCJ6	419 aa		13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.9	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	ABCB11	O95342	1321 aa		13.9	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	PTPDC1	A2A3K4	754 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	DNM1L	O00429	736 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	RARB	P10826	455 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	KIF5B	P33176	963 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	BAAT	Q14032	418 aa	Predicted RBP	13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	COL9A3	Q14050	684 aa	Predicted RBP	13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	RNF207	Q6ZRF8	634 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	FBXO11	Q86XK2	927 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	RASEF	Q8IZ41	740 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ARRDC4	Q8NCT1	418 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	CTCFL	Q8NI51	663 aa	Predicted RBP	13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	NUP133	Q8WUM0	1156 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	DPF3	Q92784	378 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	MAF1	Q9H063	256 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ABHD16B	Q9H3Z7	469 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	GPHN	Q9NQX3	736 aa	Predicted RBP	13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ADD3	Q9UEY8	706 aa	Known RBP	13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	FAM184B	Q9ULE4	1060 aa		13.89	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	LOC102724159	A0A0B4J2E5	919 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ZBTB5	O15062	677 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	HMGB1	P09429	215 aa	Known RBP	13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	CALM1	P0DP23	149 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	CALM2	P0DP24	149 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	CALM3	P0DP25	149 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	COL6A1	P12109	1028 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	HSPA4	P34932	840 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ACVR2B	Q13705	512 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	PWP2	Q15269	919 aa	Known RBP	13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ADCK5	Q3MIX3	580 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ANO1	Q5XXA6	986 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	SLC30A10	Q6XR72	485 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	DHX32	Q7L7V1	743 aa	Known RBP	13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	RGS22	Q8NE09	1264 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	KCNB2	Q92953	911 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	MTMR8	Q96EF0	704 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	MYL10	Q9BUA6	226 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	AMN	Q9BXJ7	453 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	RIOX1	Q9H6W3	641 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	XPNPEP3	Q9NQH7	507 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	MRPL11	Q9Y3B7	192 aa	Known RBP	13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	SLC12A7	Q9Y666	1083 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ASTN1	O14525	1302 aa		13.88	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	KBTBD13	C9JR72	458 aa		13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	CALML3	P27482	149 aa		13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	RPS6	P62753	249 aa	Known RBP	13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	TRAF1	Q13077	416 aa		13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	SGMS1	Q86VZ5	419 aa		13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	HOMER1	Q86YM7	354 aa		13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	MCF2L2	Q86YR7	1114 aa		13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	MPHOSPH6	Q99547	160 aa	Known RBP	13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	LZTS2	Q9BRK4	669 aa		13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	LRRC2	Q9BYS8	371 aa		13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	UPF2	Q9HAU5	1272 aa	Known RBP	13.87	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	CYTH3	O43739	400 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	EVI5	O60447	810 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	MYCN	P04198	464 aa	Predicted RBP	13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	GNAQ	P50148	359 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	ALDH5A1	P51649	535 aa	Predicted RBP	13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	EXOSC10	Q01780	885 aa	Known RBP	13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	SLC35G1	Q2M3R5	365 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	CCDC144B	Q3MJ40	725 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	GJC2	Q5T442	439 aa	Predicted RBP	13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	SYNE3	Q6ZMZ3	975 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	RNF180	Q86T96	592 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	DNER	Q8NFT8	737 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	MORC4	Q8TE76	937 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	PURB	Q96QR8	312 aa	Known RBP	13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	PIGS	Q96S52	555 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	SPZ1	Q9BXG8	430 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	KATNBL1	Q9H079	304 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	SNX14	Q9Y5W7	946 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	NR2E3	Q9Y5X4	410 aa		13.86	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	PNMA6F	A0A0J9YX94	578 aa		13.85	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	PPP1R11	O60927	126 aa	Predicted RBP	13.85	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	PGK1	P00558	417 aa		13.85	□□□□□ -0.19
ARFGAP1-223	ENST00000550188	SMARCA1	P28370	1054 aa		13.85	□□□□□ -0.19

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