RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 ME3Q16798 604 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.26□□□□□ -1.41
KRR1-203ENST00000550023 STAG2Q8N3U4 1231 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 ZBTB38Q8NAP3 1195 aaPredicted RBP6.26□□□□□ -1.41
KRR1-203ENST00000550023 SMARCC2Q8TAQ2 1214 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 COL26A1Q96A83 441 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 FUCA2Q9BTY2 467 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 SIL1Q9H173 461 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 DDX19AQ9NUU7 478 aaKnown RBP6.26□□□□□ -1.41
KRR1-203ENST00000550023 PAG1Q9NWQ8 432 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 TPCN1Q9ULQ1 816 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 NOL7Q9UMY1 257 aaKnown RBP6.26□□□□□ -1.41
KRR1-203ENST00000550023 AKAP2Q9Y2D5 859 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.26□□□□□ -1.41
KRR1-203ENST00000550023 DOCK2Q92608 1830 aa6.26□□□□□ -1.41
KRR1-203ENST00000550023 ZNF335Q9H4Z2 1342 aaPredicted RBP6.25□□□□□ -1.41
KRR1-203ENST00000550023 SLIT2O94813 1529 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 LRRC10BA6NIK2 292 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 ERVV-1B6SEH8 477 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 PFKFB2O60825 505 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 STARD3NLO95772 234 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 CSF1RP07333 972 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 PRKCSHP14314 528 aaPredicted RBP6.25□□□□□ -1.41
KRR1-203ENST00000550023 CDC25BP30305 580 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 SOX18P35713 384 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 CTSWP56202 376 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 IRF5Q13568 498 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 SGO2Q562F6 1265 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 LMBR1LQ6UX01 489 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 C1QL4Q86Z23 238 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 CCDC83Q8IWF9 413 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 FOXD4L4Q8WXT5 416 aaPredicted RBP6.25□□□□□ -1.41
KRR1-203ENST00000550023 DDX17Q92841 729 aaKnown RBP6.25□□□□□ -1.41
KRR1-203ENST00000550023 NEK1Q96PY6 1258 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 C2orf49Q9BVC5 232 aaPredicted RBP6.25□□□□□ -1.41
KRR1-203ENST00000550023 RUSC1Q9BVN2 902 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 ADAM19Q9H013 955 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 CCDC8Q9H0W5 538 aaPredicted RBP6.25□□□□□ -1.41
KRR1-203ENST00000550023 BOLA2Q9H3K6 86 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 ZSCAN16Q9H4T2 348 aaPredicted RBP6.25□□□□□ -1.41
KRR1-203ENST00000550023 GDPD2Q9HCC8 539 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 THRAP3Q9Y2W1 955 aaKnown RBP6.25□□□□□ -1.41
KRR1-203ENST00000550023 MAST2Q6P0Q8 1798 aa6.25□□□□□ -1.41
KRR1-203ENST00000550023 A0A1B0GUL7 405 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 FAM95CA0A1B0GW59 222 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 M0R2N6 131 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 DDX3YO15523 660 aaKnown RBP6.24□□□□□ -1.41
KRR1-203ENST00000550023 RAD21O60216 631 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 CYP21A2P08686 494 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 HSP90B1P14625 803 aaKnown RBP6.24□□□□□ -1.41
KRR1-203ENST00000550023 IL6STP40189 918 aaPredicted RBP6.24□□□□□ -1.41
KRR1-203ENST00000550023 RCAN1P53805 252 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 RESTQ13127 1097 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 CCDC102BQ68D86 513 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 TMED8Q6PL24 325 aaPredicted RBP6.24□□□□□ -1.41
KRR1-203ENST00000550023 DBX2Q6ZNG2 339 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 TTLL7Q6ZT98 887 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 CDC37L1Q7L3B6 337 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 USP48Q86UV5 1035 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 STK11IPQ8N1F8 1099 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 VGLL2Q8N8G2 317 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 KLHDC4Q8TBB5 520 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 APPBP2Q92624 585 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 LACRTQ9GZZ8 138 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 RC3H2Q9HBD1 1191 aaKnown RBP6.24□□□□□ -1.41
KRR1-203ENST00000550023 SEC31BQ9NQW1 1179 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 FAM53CQ9NYF3 392 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 USP25Q9UHP3 1055 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 CTNNA3Q9UI47 895 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 BCS1LQ9Y276 419 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 CNPY2Q9Y2B0 182 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 ZKSCAN5Q9Y2L8 839 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 MYH7P12883 1935 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 MYH15Q9Y2K3 1946 aa6.24□□□□□ -1.41
KRR1-203ENST00000550023 PIK3CDO00329 1044 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 RNF113AO15541 343 aaKnown RBP6.23□□□□□ -1.41
KRR1-203ENST00000550023 FIBPO43427 364 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 IGSF3O75054 1194 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 TSPAN15O95858 294 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 TPM3P06753 285 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 TPM2P07951 284 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 MSNP26038 577 aaKnown RBP6.23□□□□□ -1.41
KRR1-203ENST00000550023 ATP1A2P50993 1020 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 TTF1Q15361 905 aaPredicted RBP6.23□□□□□ -1.41
KRR1-203ENST00000550023 ECM1Q16610 540 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 CCDC57Q2TAC2 916 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 ZSCAN25Q6NSZ9 544 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 NOL8Q76FK4 1167 aaKnown RBP6.23□□□□□ -1.41
KRR1-203ENST00000550023 ZNF274Q96GC6 653 aaPredicted RBP6.23□□□□□ -1.41
KRR1-203ENST00000550023 DNAJC2Q99543 621 aaKnown RBP6.23□□□□□ -1.41
KRR1-203ENST00000550023 MTA3Q9BTC8 594 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.23□□□□□ -1.41
KRR1-203ENST00000550023 A0A1B0GUL6 1792 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 THSD7AQ9UPZ6 1657 aa6.23□□□□□ -1.41
KRR1-203ENST00000550023 PDS5AQ29RF7 1337 aaKnown RBP6.23□□□□□ -1.41
KRR1-203ENST00000550023 VPS37CA5D8V6 355 aaPredicted RBP6.22□□□□□ -1.41
KRR1-203ENST00000550023 GOLIM4O00461 696 aa6.22□□□□□ -1.41
KRR1-203ENST00000550023 CTAGE5O15320 804 aa6.22□□□□□ -1.41
KRR1-203ENST00000550023 FOXP2O15409 715 aa6.22□□□□□ -1.41
KRR1-203ENST00000550023 DHX16O60231 1041 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms