RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 ZBTB5O15062 677 aa22.48■■□□□ 1.19
DDX54-207ENST00000550016 CYTH3O43739 400 aa22.48■■□□□ 1.19
DDX54-207ENST00000550016 INHAP05111 366 aa22.48■■□□□ 1.19
DDX54-207ENST00000550016 TAL1P17542 331 aaPredicted RBP22.48■■□□□ 1.19
DDX54-207ENST00000550016 RCAN1P53805 252 aa22.48■■□□□ 1.19
DDX54-207ENST00000550016 ZNF792Q3KQV3 632 aa22.48■■□□□ 1.19
DDX54-207ENST00000550016 PDRG1Q9NUG6 133 aa22.48■■□□□ 1.19
DDX54-207ENST00000550016 NAP1L2Q9ULW6 460 aaPredicted RBP22.48■■□□□ 1.19
DDX54-207ENST00000550016 USH1GQ495M9 461 aa22.47■■□□□ 1.19
DDX54-207ENST00000550016 OLFML2BQ68BL8 750 aa22.47■■□□□ 1.19
DDX54-207ENST00000550016 SRBD1Q8N5C6 995 aaKnown RBP22.47■■□□□ 1.19
DDX54-207ENST00000550016 PIGSQ96S52 555 aa22.47■■□□□ 1.19
DDX54-207ENST00000550016 AMNQ9BXJ7 453 aa22.47■■□□□ 1.19
DDX54-207ENST00000550016 A1CFQ9NQ94 594 aaKnown RBP22.47■■□□□ 1.19
DDX54-207ENST00000550016 RBM28Q9NW13 759 aaKnown RBP22.47■■□□□ 1.19
DDX54-207ENST00000550016 FLRT1Q9NZU1 646 aa22.47■■□□□ 1.19
DDX54-207ENST00000550016 PFASO15067 1338 aa22.47■■□□□ 1.19
DDX54-207ENST00000550016 ABCB11O95342 1321 aa22.47■■□□□ 1.19
DDX54-207ENST00000550016 LCTP09848 1927 aa22.47■■□□□ 1.19
DDX54-207ENST00000550016 PNMA6FA0A0J9YX94 578 aa22.46■■□□□ 1.19
DDX54-207ENST00000550016 PLEKHA8P1O95397 391 aa22.46■■□□□ 1.19
DDX54-207ENST00000550016 TRAF1Q13077 416 aa22.46■■□□□ 1.19
DDX54-207ENST00000550016 PPP2R5BQ15173 497 aa22.46■■□□□ 1.19
DDX54-207ENST00000550016 RTN1Q16799 776 aa22.46■■□□□ 1.19
DDX54-207ENST00000550016 MFSD14CQ5VZR4 134 aa22.46■■□□□ 1.19
DDX54-207ENST00000550016 CLEC4DQ8WXI8 215 aa22.46■■□□□ 1.19
DDX54-207ENST00000550016 MAML3Q96JK9 1138 aa22.46■■□□□ 1.19
DDX54-207ENST00000550016 GOLGA8AA7E2F4 631 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 GOLGA8BA8MQT2 603 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 MYCP01106 439 aaPredicted RBP22.45■■□□□ 1.18
DDX54-207ENST00000550016 IGHA2P01877 340 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 CCL5P13501 91 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 EVCP57679 992 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 TRIM32Q13049 653 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 TOB2Q14106 344 aaPredicted RBP22.45■■□□□ 1.18
DDX54-207ENST00000550016 MTFR1Q15390 333 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 NSMFQ6X4W1 530 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 TMTC3Q6ZXV5 915 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 HOMER1Q86YM7 354 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 RRP36Q96EU6 259 aaKnown RBP22.45■■□□□ 1.18
DDX54-207ENST00000550016 CYP39A1Q9NYL5 469 aa22.45■■□□□ 1.18
DDX54-207ENST00000550016 MRPL11Q9Y3B7 192 aaKnown RBP22.45■■□□□ 1.18
DDX54-207ENST00000550016 POTEB2H3BUK9 544 aa22.44■■□□□ 1.18
DDX54-207ENST00000550016 NFIBO00712 420 aa22.44■■□□□ 1.18
DDX54-207ENST00000550016 PPP1R11O60927 126 aaPredicted RBP22.44■■□□□ 1.18
DDX54-207ENST00000550016 CACNB2Q08289 660 aaPredicted RBP22.44■■□□□ 1.18
DDX54-207ENST00000550016 CMTR1Q8N1G2 835 aaKnown RBP22.44■■□□□ 1.18
DDX54-207ENST00000550016 RGS22Q8NE09 1264 aa22.44■■□□□ 1.18
DDX54-207ENST00000550016 TMEM106CQ9BVX2 250 aa22.44■■□□□ 1.18
DDX54-207ENST00000550016 MAF1Q9H063 256 aa22.44■■□□□ 1.18
DDX54-207ENST00000550016 ALDH8A1Q9H2A2 487 aaPredicted RBP22.44■■□□□ 1.18
DDX54-207ENST00000550016 CCDC196A0A1B0GTZ2 297 aa22.43■■□□□ 1.18
DDX54-207ENST00000550016 METAP2P50579 478 aaKnown RBP eCLIP22.43■■□□□ 1.183e-7■□□□□ 9.2
DDX54-207ENST00000550016 CNTN2Q02246 1040 aa22.43■■□□□ 1.18
DDX54-207ENST00000550016 MAP3K21Q5TCX8 1036 aa22.43■■□□□ 1.18
DDX54-207ENST00000550016 ZNF467Q7Z7K2 595 aaPredicted RBP22.43■■□□□ 1.18
DDX54-207ENST00000550016 FAM133AQ8N9E0 248 aa22.43■■□□□ 1.18
DDX54-207ENST00000550016 PIBF1Q8WXW3 757 aa22.43■■□□□ 1.18
DDX54-207ENST00000550016 C22orf23Q9BZE7 217 aa22.43■■□□□ 1.18
DDX54-207ENST00000550016 UNC93B1Q9H1C4 597 aa22.43■■□□□ 1.18
DDX54-207ENST00000550016 FAM217BQ9NTX9 383 aaPredicted RBP22.43■■□□□ 1.18
DDX54-207ENST00000550016 PCDHA1Q9Y5I3 950 aa22.43■■□□□ 1.18
DDX54-207ENST00000550016 NID2Q14112 1375 aa22.42■■□□□ 1.18
DDX54-207ENST00000550016 RPTORQ8N122 1335 aa22.42■■□□□ 1.18
DDX54-207ENST00000550016 PRKAR2AP13861 404 aaKnown RBP22.42■■□□□ 1.18
DDX54-207ENST00000550016 PDIA3P30101 505 aaKnown RBP22.42■■□□□ 1.18
DDX54-207ENST00000550016 CYP2C19P33261 490 aa22.42■■□□□ 1.18
DDX54-207ENST00000550016 BAATQ14032 418 aaPredicted RBP22.42■■□□□ 1.18
DDX54-207ENST00000550016 CCDC82Q8N4S0 544 aa22.42■■□□□ 1.18
DDX54-207ENST00000550016 MSL3Q8N5Y2 521 aaKnown RBP22.42■■□□□ 1.18
DDX54-207ENST00000550016 TINF2Q9BSI4 451 aa22.42■■□□□ 1.18
DDX54-207ENST00000550016 RNF208Q9H0X6 261 aa22.42■■□□□ 1.18
DDX54-207ENST00000550016 HMX1Q9NP08 348 aaPredicted RBP22.42■■□□□ 1.18
DDX54-207ENST00000550016 SEC63Q9UGP8 760 aaKnown RBP22.42■■□□□ 1.18
DDX54-207ENST00000550016 CENPFP49454 3210 aa22.42■■□□□ 1.18
DDX54-207ENST00000550016 PTPDC1A2A3K4 754 aa22.41■■□□□ 1.18
DDX54-207ENST00000550016 CDC27P30260 824 aa22.41■■□□□ 1.18
DDX54-207ENST00000550016 RNF207Q6ZRF8 634 aa22.41■■□□□ 1.18
DDX54-207ENST00000550016 MCF2L2Q86YR7 1114 aa22.41■■□□□ 1.18
DDX54-207ENST00000550016 ZNF274Q96GC6 653 aaPredicted RBP22.41■■□□□ 1.18
DDX54-207ENST00000550016 UPF2Q9HAU5 1272 aaKnown RBP22.41■■□□□ 1.18
DDX54-207ENST00000550016 SOWAHBA6NEL2 793 aa22.4■■□□□ 1.18
DDX54-207ENST00000550016 CAPN15O75808 1086 aa22.4■■□□□ 1.18
DDX54-207ENST00000550016 ADD1P35611 737 aaKnown RBP22.4■■□□□ 1.18
DDX54-207ENST00000550016 RBM25P49756 843 aaKnown RBP22.4■■□□□ 1.18
DDX54-207ENST00000550016 FUT2Q10981 343 aa22.4■■□□□ 1.18
DDX54-207ENST00000550016 ANKRD1Q15327 319 aa22.4■■□□□ 1.18
DDX54-207ENST00000550016 MAMDC4Q6UXC1 1216 aa22.4■■□□□ 1.18
DDX54-207ENST00000550016 FGD4Q96M96 766 aa22.4■■□□□ 1.18
DDX54-207ENST00000550016 LARP6Q9BRS8 491 aaKnown RBP22.4■■□□□ 1.18
DDX54-207ENST00000550016 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.4■■□□□ 1.18
DDX54-207ENST00000550016 SYNGAP1Q96PV0 1343 aa22.39■■□□□ 1.18
DDX54-207ENST00000550016 GJB1P08034 283 aa22.39■■□□□ 1.17
DDX54-207ENST00000550016 CALML3P27482 149 aa22.39■■□□□ 1.17
DDX54-207ENST00000550016 NEK4P51957 841 aa22.39■■□□□ 1.17
DDX54-207ENST00000550016 RPS6P62753 249 aaKnown RBP22.39■■□□□ 1.17
DDX54-207ENST00000550016 PAK6Q9NQU5 681 aaPredicted RBP22.39■■□□□ 1.17
DDX54-207ENST00000550016 FRMPD3Q5JV73 1810 aa22.38■■□□□ 1.17
DDX54-207ENST00000550016 CNTNAP5Q8WYK1 1306 aa22.38■■□□□ 1.17
DDX54-207ENST00000550016 SOX10P56693 466 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms