RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 LBHD1Q9BQE6 289 aaPredicted RBP28.3■■■□□ 2.12
USP44-205ENST00000549639 UBE2OQ9C0C9 1292 aaKnown RBP28.3■■■□□ 2.12
USP44-205ENST00000549639 CST5P28325 142 aaPredicted RBP28.29■■■□□ 2.12
USP44-205ENST00000549639 KLHDC9Q8NEP7 349 aa28.29■■■□□ 2.12
USP44-205ENST00000549639 NUP133Q8WUM0 1156 aa28.29■■■□□ 2.12
USP44-205ENST00000549639 UBAC1Q9BSL1 405 aa28.29■■■□□ 2.12
USP44-205ENST00000549639 KATNBL1Q9H079 304 aa28.29■■■□□ 2.12
USP44-205ENST00000549639 IL25Q9H293 177 aa28.29■■■□□ 2.12
USP44-205ENST00000549639 ADD3Q9UEY8 706 aaKnown RBP28.29■■■□□ 2.12
USP44-205ENST00000549639 TDHQ8IZJ6 230 aa28.28■■■□□ 2.12
USP44-205ENST00000549639 ENAHQ8N8S7 591 aaPredicted RBP28.28■■■□□ 2.12
USP44-205ENST00000549639 PCSK9Q8NBP7 692 aaKnown RBP28.28■■■□□ 2.12
USP44-205ENST00000549639 LENG1Q96BZ8 264 aaPredicted RBP28.28■■■□□ 2.12
USP44-205ENST00000549639 TNKSO95271 1327 aa28.27■■■□□ 2.12
USP44-205ENST00000549639 A0A1W2PQ45 241 aaPredicted RBP28.27■■■□□ 2.12
USP44-205ENST00000549639 A0A1W2PQY0 241 aa28.27■■■□□ 2.12
USP44-205ENST00000549639 ACLYP53396 1101 aa28.27■■■□□ 2.12
USP44-205ENST00000549639 GJA9P57773 515 aa28.27■■■□□ 2.12
USP44-205ENST00000549639 TRDNQ13061 729 aa28.27■■■□□ 2.12
USP44-205ENST00000549639 TRIM60Q495X7 471 aa28.27■■■□□ 2.12
USP44-205ENST00000549639 ASPRV1Q53RT3 343 aa28.27■■■□□ 2.12
USP44-205ENST00000549639 MAF1Q9H063 256 aa28.27■■■□□ 2.12
USP44-205ENST00000549639 UPF3AQ9H1J1 476 aaKnown RBP28.27■■■□□ 2.12
USP44-205ENST00000549639 U3KPZ7 1027 aaPredicted RBP28.27■■■□□ 2.12
USP44-205ENST00000549639 MCM3APO60318 1980 aa28.27■■■□□ 2.12
USP44-205ENST00000549639 CCSAPQ6IQ19 270 aaPredicted RBP28.26■■■□□ 2.11
USP44-205ENST00000549639 MORC4Q8TE76 937 aa28.26■■■□□ 2.11
USP44-205ENST00000549639 NKX3-2P78367 333 aa28.25■■■□□ 2.11
USP44-205ENST00000549639 MDM2Q00987 491 aaPredicted RBP28.25■■■□□ 2.11
USP44-205ENST00000549639 LRIT3Q3SXY7 679 aa28.25■■■□□ 2.11
USP44-205ENST00000549639 STARD7Q9NQZ5 370 aa28.25■■■□□ 2.11
USP44-205ENST00000549639 C6orf222P0C671 652 aaPredicted RBP28.24■■■□□ 2.11
USP44-205ENST00000549639 TNFAIP2Q03169 654 aa28.24■■■□□ 2.11
USP44-205ENST00000549639 BAATQ14032 418 aaPredicted RBP28.24■■■□□ 2.11
USP44-205ENST00000549639 KCNA10Q16322 511 aa28.24■■■□□ 2.11
USP44-205ENST00000549639 VTA1Q9NP79 307 aa28.24■■■□□ 2.11
USP44-205ENST00000549639 ELP1O95163 1332 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 NFIBO00712 420 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 SGSM2O43147 1006 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 GOLGA8HP0CJ92 632 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 TLE2Q04725 743 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 IFIT1BQ5T764 474 aaKnown RBP28.23■■■□□ 2.11
USP44-205ENST00000549639 IQSEC1Q6DN90 963 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 RNF207Q6ZRF8 634 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 RGS22Q8NE09 1264 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 CLEC4DQ8WXI8 215 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 GLT1D1Q96MS3 346 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 TOX2Q96NM4 488 aa28.23■■■□□ 2.11
USP44-205ENST00000549639 MPHOSPH6Q99547 160 aaKnown RBP28.23■■■□□ 2.11
USP44-205ENST00000549639 ASTN1O14525 1302 aa28.22■■■□□ 2.11
USP44-205ENST00000549639 PTPDC1A2A3K4 754 aa28.22■■■□□ 2.11
USP44-205ENST00000549639 ADCY6O43306 1168 aa28.22■■■□□ 2.11
USP44-205ENST00000549639 PARP1P09874 1014 aaKnown RBP28.22■■■□□ 2.11
USP44-205ENST00000549639 GPR153Q6NV75 609 aa28.22■■■□□ 2.11
USP44-205ENST00000549639 PRDM5Q9NQX1 630 aaPredicted RBP28.22■■■□□ 2.11
USP44-205ENST00000549639 PDLIM7Q9NR12 457 aa28.22■■■□□ 2.11
USP44-205ENST00000549639 Q9Y3F1 56 aa28.22■■■□□ 2.11
USP44-205ENST00000549639 LAMA3Q16787 3333 aa28.22■■■□□ 2.11
USP44-205ENST00000549639 CYP21A2P08686 494 aa28.21■■■□□ 2.11
USP44-205ENST00000549639 ALDH5A1P51649 535 aaPredicted RBP28.21■■■□□ 2.11
USP44-205ENST00000549639 GNASQ5JWF2 1037 aa28.21■■■□□ 2.11
USP44-205ENST00000549639 UBA5Q9GZZ9 404 aa28.21■■■□□ 2.11
USP44-205ENST00000549639 SZT2Q5T011 3432 aa28.21■■■□□ 2.11
USP44-205ENST00000549639 MROH7Q68CQ1 1323 aa28.2■■■□□ 2.11
USP44-205ENST00000549639 B4DLN1 442 aa28.2■■■□□ 2.1
USP44-205ENST00000549639 ASGR1P07306 291 aa28.2■■■□□ 2.1
USP44-205ENST00000549639 CLTBP09497 229 aa28.2■■■□□ 2.1
USP44-205ENST00000549639 MRPL12P52815 198 aaKnown RBP28.2■■■□□ 2.1
USP44-205ENST00000549639 PTH1RQ03431 593 aa28.2■■■□□ 2.1
USP44-205ENST00000549639 NOL8Q76FK4 1167 aaKnown RBP28.2■■■□□ 2.1
USP44-205ENST00000549639 ANKRD33Q7Z3H0 272 aa28.2■■■□□ 2.1
USP44-205ENST00000549639 DNERQ8NFT8 737 aa28.2■■■□□ 2.1
USP44-205ENST00000549639 GNEQ9Y223 722 aaKnown RBP28.2■■■□□ 2.1
USP44-205ENST00000549639 MYADML2A6NDP7 307 aa28.19■■■□□ 2.1
USP44-205ENST00000549639 SEC23AQ15436 765 aa28.19■■■□□ 2.1
USP44-205ENST00000549639 CDC37Q16543 378 aaPredicted RBP28.19■■■□□ 2.1
USP44-205ENST00000549639 TAPT1Q6NXT6 567 aa28.19■■■□□ 2.1
USP44-205ENST00000549639 ADGRF4Q8IZF3 695 aa28.19■■■□□ 2.1
USP44-205ENST00000549639 AP5M1Q9H0R1 490 aa28.19■■■□□ 2.1
USP44-205ENST00000549639 ABCB11O95342 1321 aa28.18■■■□□ 2.1
USP44-205ENST00000549639 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.18■■■□□ 2.1
USP44-205ENST00000549639 ERICH2A1L162 156 aa28.18■■■□□ 2.1
USP44-205ENST00000549639 DCDC2CA8MYV0 355 aa28.18■■■□□ 2.1
USP44-205ENST00000549639 SOX1O00570 391 aaPredicted RBP28.18■■■□□ 2.1
USP44-205ENST00000549639 CALML3P27482 149 aa28.18■■■□□ 2.1
USP44-205ENST00000549639 RPS6P62753 249 aaKnown RBP28.18■■■□□ 2.1
USP44-205ENST00000549639 RALYLQ86SE5 291 aaKnown RBP28.18■■■□□ 2.1
USP44-205ENST00000549639 TLK2Q86UE8 772 aa28.18■■■□□ 2.1
USP44-205ENST00000549639 NCOA7Q8NI08 942 aa28.18■■■□□ 2.1
USP44-205ENST00000549639 MAP4K1Q92918 833 aa28.18■■■□□ 2.1
USP44-205ENST00000549639 LCTP09848 1927 aa28.18■■■□□ 2.1
USP44-205ENST00000549639 LRRC37A2A6NM11 1700 aa28.18■■■□□ 2.1
USP44-205ENST00000549639 ZEB2O60315 1214 aa28.17■■■□□ 2.1
USP44-205ENST00000549639 CABYRO75952 493 aa28.17■■■□□ 2.1
USP44-205ENST00000549639 SART3Q15020 963 aaKnown RBP28.17■■■□□ 2.1
USP44-205ENST00000549639 USH1GQ495M9 461 aa28.17■■■□□ 2.1
USP44-205ENST00000549639 SLC30A10Q6XR72 485 aa28.17■■■□□ 2.1
USP44-205ENST00000549639 CYB5R4Q7L1T6 521 aa28.17■■■□□ 2.1
USP44-205ENST00000549639 FBXO16Q8IX29 292 aaPredicted RBP28.17■■■□□ 2.1
USP44-205ENST00000549639 LTBP2Q14767 1821 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms