RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 MCM3APO60318 1980 aa21.86■■□□□ 1.09
CHMP1A-207ENST00000549328 WDR19Q8NEZ3 1342 aa21.85■■□□□ 1.09
CHMP1A-207ENST00000549328 MOXD2PA6NHM9 499 aa21.85■■□□□ 1.09
CHMP1A-207ENST00000549328 CST5P28325 142 aaPredicted RBP21.85■■□□□ 1.09
CHMP1A-207ENST00000549328 UBAC1Q9BSL1 405 aa21.85■■□□□ 1.09
CHMP1A-207ENST00000549328 UBE2OQ9C0C9 1292 aaKnown RBP21.85■■□□□ 1.09
CHMP1A-207ENST00000549328 SPC25Q9HBM1 224 aa21.85■■□□□ 1.09
CHMP1A-207ENST00000549328 ADD3Q9UEY8 706 aaKnown RBP21.85■■□□□ 1.09
CHMP1A-207ENST00000549328 TNKSO95271 1327 aa21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 LOC102724159A0A0B4J2E5 919 aa21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 ACLYP53396 1101 aa21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 PWP2Q15269 919 aaKnown RBP21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 TRIM60Q495X7 471 aa21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 CCSAPQ6IQ19 270 aaPredicted RBP21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 PCSK9Q8NBP7 692 aaKnown RBP21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 NUP133Q8WUM0 1156 aa21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 LBHD1Q9BQE6 289 aaPredicted RBP21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 UPF3AQ9H1J1 476 aaKnown RBP21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 U3KPZ7 1027 aaPredicted RBP21.84■■□□□ 1.09
CHMP1A-207ENST00000549328 ASTN1O14525 1302 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 A0A1W2PQ45 241 aaPredicted RBP21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 A0A1W2PQY0 241 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 NFIBO00712 420 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 SGSM2O43147 1006 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 ADCY6O43306 1168 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 GOLGA8HP0CJ92 632 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 GJA9P57773 515 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 NKX3-2P78367 333 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 TRDNQ13061 729 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 BAATQ14032 418 aaPredicted RBP21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 KCNA10Q16322 511 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 ASPRV1Q53RT3 343 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 TDHQ8IZJ6 230 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 MORC4Q8TE76 937 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 CLEC4DQ8WXI8 215 aa21.83■■□□□ 1.09
CHMP1A-207ENST00000549328 MDM2Q00987 491 aaPredicted RBP21.82■■□□□ 1.08
CHMP1A-207ENST00000549328 TNFAIP2Q03169 654 aa21.82■■□□□ 1.08
CHMP1A-207ENST00000549328 PTH1RQ03431 593 aa21.82■■□□□ 1.08
CHMP1A-207ENST00000549328 MAF1Q9H063 256 aa21.82■■□□□ 1.08
CHMP1A-207ENST00000549328 CYP21A2P08686 494 aa21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 C6orf222P0C671 652 aaPredicted RBP21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 TLE2Q04725 743 aa21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 SEC23AQ15436 765 aa21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 LRIT3Q3SXY7 679 aa21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 IFIT1BQ5T764 474 aaKnown RBP21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 IQSEC1Q6DN90 963 aa21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 RGS22Q8NE09 1264 aa21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 UBA5Q9GZZ9 404 aa21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 STARD7Q9NQZ5 370 aa21.81■■□□□ 1.08
CHMP1A-207ENST00000549328 ELP1O95163 1332 aa21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 LAMA3Q16787 3333 aa21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 PTPDC1A2A3K4 754 aa21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 PARP1P09874 1014 aaKnown RBP21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 GNASQ5JWF2 1037 aa21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 RNF207Q6ZRF8 634 aa21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 TOX2Q96NM4 488 aa21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 VTA1Q9NP79 307 aa21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 PDLIM7Q9NR12 457 aa21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 GNEQ9Y223 722 aaKnown RBP21.8■■□□□ 1.08
CHMP1A-207ENST00000549328 MYADML2A6NDP7 307 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 ASGR1P07306 291 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 ALDH5A1P51649 535 aaPredicted RBP21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 TAPT1Q6NXT6 567 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 CYB5R4Q7L1T6 521 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 ANKRD33Q7Z3H0 272 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 ADGRF4Q8IZF3 695 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 MAP4K1Q92918 833 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 GLT1D1Q96MS3 346 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 PURBQ96QR8 312 aaKnown RBP21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 CPVLQ9H3G5 476 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 Q9Y3F1 56 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 SZT2Q5T011 3432 aa21.79■■□□□ 1.08
CHMP1A-207ENST00000549328 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 SOX1O00570 391 aaPredicted RBP21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 CTAGE5O15320 804 aa21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 RPS6P62753 249 aaKnown RBP21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 CDC37Q16543 378 aaPredicted RBP21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 GPR153Q6NV75 609 aa21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 DNERQ8NFT8 737 aa21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 PRDM5Q9NQX1 630 aaPredicted RBP21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 LCTP09848 1927 aa21.78■■□□□ 1.08
CHMP1A-207ENST00000549328 CLTBP09497 229 aa21.77■■□□□ 1.08
CHMP1A-207ENST00000549328 CALML3P27482 149 aa21.77■■□□□ 1.08
CHMP1A-207ENST00000549328 IRX5P78411 483 aaPredicted RBP21.77■■□□□ 1.08
CHMP1A-207ENST00000549328 SLC30A10Q6XR72 485 aa21.77■■□□□ 1.08
CHMP1A-207ENST00000549328 NCOA7Q8NI08 942 aa21.77■■□□□ 1.08
CHMP1A-207ENST00000549328 MPHOSPH6Q99547 160 aaKnown RBP21.77■■□□□ 1.08
CHMP1A-207ENST00000549328 AP5M1Q9H0R1 490 aa21.77■■□□□ 1.08
CHMP1A-207ENST00000549328 PDGFCQ9NRA1 345 aa21.77■■□□□ 1.08
CHMP1A-207ENST00000549328 DDX49Q9Y6V7 483 aaKnown RBP21.77■■□□□ 1.08
CHMP1A-207ENST00000549328 ABCB11O95342 1321 aa21.77■■□□□ 1.07
CHMP1A-207ENST00000549328 TRIM43BA6NCK2 446 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 DCDC2CA8MYV0 355 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 E7EWF7 191 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 SMPD1P17405 629 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 USH1GQ495M9 461 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 KIAA1211Q6ZU35 1233 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 CENPQQ7L2Z9 268 aaPredicted RBP21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 EEPD1Q7L9B9 569 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms