RNA–Protein interactions for RNA: ENST00000549038.5

RNF41-206, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-206ENST00000549038 PPP1R11O60927 126 aaPredicted RBP11.93□□□□□ -0.5
RNF41-206ENST00000549038 FLOT1O75955 427 aa11.93□□□□□ -0.5
RNF41-206ENST00000549038 TOB1P50616 345 aaPredicted RBP11.93□□□□□ -0.5
RNF41-206ENST00000549038 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
RNF41-206ENST00000549038 ORC2Q13416 577 aaPredicted RBP11.93□□□□□ -0.5
RNF41-206ENST00000549038 PTPAQ15257 358 aa11.93□□□□□ -0.5
RNF41-206ENST00000549038 TTC38Q5R3I4 469 aa11.93□□□□□ -0.5
RNF41-206ENST00000549038 CAVIN1Q6NZI2 390 aaKnown RBP11.93□□□□□ -0.5
RNF41-206ENST00000549038 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
RNF41-206ENST00000549038 CATSPERGQ6ZRH7 1159 aa11.93□□□□□ -0.5
RNF41-206ENST00000549038 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
RNF41-206ENST00000549038 FTOQ9C0B1 505 aaKnown RBP eCLIP11.93□□□□□ -0.5
RNF41-206ENST00000549038 KCNH4Q9UQ05 1017 aa11.93□□□□□ -0.5
RNF41-206ENST00000549038 CTDP1Q9Y5B0 961 aaPredicted RBP11.93□□□□□ -0.5
RNF41-206ENST00000549038 A0A0G2JLL6 359 aaPredicted RBP11.92□□□□□ -0.5
RNF41-206ENST00000549038 CUTAO60888 179 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 ZBED4O75132 1171 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
RNF41-206ENST00000549038 ATP2B1P20020 1258 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 COG2Q14746 738 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 CCDC73Q6ZRK6 1079 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 PRRT2Q7Z6L0 340 aaPredicted RBP11.92□□□□□ -0.5
RNF41-206ENST00000549038 KRI1Q8N9T8 703 aaKnown RBP11.92□□□□□ -0.5
RNF41-206ENST00000549038 OPTNQ96CV9 577 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 PGBD1Q96JS3 809 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 NAP1L4Q99733 375 aaKnown RBP11.92□□□□□ -0.5
RNF41-206ENST00000549038 DDX19AQ9NUU7 478 aaKnown RBP11.92□□□□□ -0.5
RNF41-206ENST00000549038 HOXC10Q9NYD6 342 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 PPP1R9AQ9ULJ8 1098 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 PCDHA7Q9UN72 937 aa11.92□□□□□ -0.5
RNF41-206ENST00000549038 MRPL11Q9Y3B7 192 aaKnown RBP11.92□□□□□ -0.5
RNF41-206ENST00000549038 ABCB11O95342 1321 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 FOSP01100 380 aaPredicted RBP11.91□□□□□ -0.5
RNF41-206ENST00000549038 DSG3P32926 999 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 AP3B2Q13367 1082 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 EARS2Q5JPH6 523 aaKnown RBP11.91□□□□□ -0.5
RNF41-206ENST00000549038 CCDC183Q5T5S1 534 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 CST9Q5W186 159 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 CCDC174Q6PII3 467 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 FASTKD5Q7L8L6 764 aaKnown RBP11.91□□□□□ -0.5
RNF41-206ENST00000549038 NEK8Q86SG6 692 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 CCAR1Q8IX12 1150 aaKnown RBP11.91□□□□□ -0.5
RNF41-206ENST00000549038 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
RNF41-206ENST00000549038 RASGRP4Q8TDF6 673 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 MRPS27Q92552 414 aaKnown RBP11.91□□□□□ -0.5
RNF41-206ENST00000549038 FERMT2Q96AC1 680 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 PCDHB6Q9Y5E3 794 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 DOCK1Q14185 1865 aa11.91□□□□□ -0.5
RNF41-206ENST00000549038 MYPNQ86TC9 1320 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 LAD1O00515 517 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 ADAMTS3O15072 1205 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 ICAM1P05362 532 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 PTPREP23469 700 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 CMA1P23946 247 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.5
RNF41-206ENST00000549038 HOXA7P31268 230 aaPredicted RBP11.9□□□□□ -0.5
RNF41-206ENST00000549038 CLK2P49760 499 aaKnown RBP11.9□□□□□ -0.5
RNF41-206ENST00000549038 SNAPC2Q13487 334 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 ZNF174Q15697 407 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 INF2Q27J81 1249 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 USH1GQ495M9 461 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 JAKMIP3Q5VZ66 844 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 ARL6IP4Q66PJ3 421 aaKnown RBP11.9□□□□□ -0.5
RNF41-206ENST00000549038 GADL1Q6ZQY3 521 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 SAMD3Q8N6K7 520 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 FSIP1Q8NA03 581 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.5
RNF41-206ENST00000549038 GZF1Q9H116 711 aaPredicted RBP11.9□□□□□ -0.5
RNF41-206ENST00000549038 SLC38A10Q9HBR0 1119 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 BIN2Q9UBW5 565 aaPredicted RBP11.9□□□□□ -0.5
RNF41-206ENST00000549038 ADAMTS5Q9UNA0 930 aa11.9□□□□□ -0.5
RNF41-206ENST00000549038 SRPRBQ9Y5M8 271 aaKnown RBP11.9□□□□□ -0.5
RNF41-206ENST00000549038 MYH6P13533 1939 aa11.9□□□□□ -0.51
RNF41-206ENST00000549038 ATAD5Q96QE3 1844 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 SPDYE3A6NKU9 549 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 VWA5AO00534 786 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 GCFC2P16383 781 aaKnown RBP11.89□□□□□ -0.51
RNF41-206ENST00000549038 GJA5P36382 358 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 ATP2C1P98194 919 aaPredicted RBP11.89□□□□□ -0.51
RNF41-206ENST00000549038 FAM160A1Q05DH4 1040 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 AXDND1Q5T1B0 1012 aaPredicted RBP11.89□□□□□ -0.51
RNF41-206ENST00000549038 TREML2Q5T2D2 321 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 MCF2L2Q86YR7 1114 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 CPXCR1Q8N123 301 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 TBCKQ8TEA7 893 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 ATG4CQ96DT6 458 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 EHMT1Q9H9B1 1298 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 FAM13BQ9NYF5 915 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 TMEM63CQ9P1W3 806 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 CCPG1Q9ULG6 757 aa11.89□□□□□ -0.51
RNF41-206ENST00000549038 ZNF536O15090 1300 aa11.88□□□□□ -0.51
RNF41-206ENST00000549038 GCOM1H8Y6P7 765 aaPredicted RBP11.88□□□□□ -0.51
RNF41-206ENST00000549038 CTAGE5O15320 804 aa11.88□□□□□ -0.51
RNF41-206ENST00000549038 KINO60870 393 aaKnown RBP11.88□□□□□ -0.51
RNF41-206ENST00000549038 POLR2MP0CAP2 368 aa11.88□□□□□ -0.51
RNF41-206ENST00000549038 LIG1P18858 919 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms