RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PGK1P00558 417 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 CHMLP26374 656 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 MAGEA10P43363 369 aaPredicted RBP13.34□□□□□ -0.27
BEST3-209ENST00000548658 RTP1P59025 263 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 CNTN2Q02246 1040 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 SNX17Q15036 470 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 CCDC144BQ3MJ40 725 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 NSMFQ6X4W1 530 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 PCSK9Q8NBP7 692 aaKnown RBP13.34□□□□□ -0.27
BEST3-209ENST00000548658 MPHOSPH6Q99547 160 aaKnown RBP13.34□□□□□ -0.27
BEST3-209ENST00000548658 CYP39A1Q9NYL5 469 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 WDR19Q8NEZ3 1342 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 TRIOBPQ9H2D6 2365 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 B4DLN1 442 aa13.33□□□□□ -0.28
BEST3-209ENST00000548658 ADAMTS4O75173 837 aa13.33□□□□□ -0.28
BEST3-209ENST00000548658 MRPL12P52815 198 aaKnown RBP13.33□□□□□ -0.28
BEST3-209ENST00000548658 SNAP25P60880 206 aa13.33□□□□□ -0.28
BEST3-209ENST00000548658 ASPRV1Q53RT3 343 aa13.33□□□□□ -0.28
BEST3-209ENST00000548658 MUM1L1Q5H9M0 696 aa13.33□□□□□ -0.28
BEST3-209ENST00000548658 RASGRP2Q7LDG7 609 aa13.33□□□□□ -0.28
BEST3-209ENST00000548658 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
BEST3-209ENST00000548658 FERMT2Q96AC1 680 aa13.33□□□□□ -0.28
BEST3-209ENST00000548658 FGD4Q96M96 766 aa13.33□□□□□ -0.28
BEST3-209ENST00000548658 UBE2OQ9C0C9 1292 aaKnown RBP13.33□□□□□ -0.28
BEST3-209ENST00000548658 ATP11BQ9Y2G3 1177 aa13.33□□□□□ -0.28
BEST3-209ENST00000548658 SOWAHBA6NEL2 793 aa13.32□□□□□ -0.28
BEST3-209ENST00000548658 PARP1P09874 1014 aaKnown RBP13.32□□□□□ -0.28
BEST3-209ENST00000548658 CST5P28325 142 aaPredicted RBP13.32□□□□□ -0.28
BEST3-209ENST00000548658 IFIT1BQ5T764 474 aaKnown RBP13.32□□□□□ -0.28
BEST3-209ENST00000548658 IQSEC1Q6DN90 963 aa13.32□□□□□ -0.28
BEST3-209ENST00000548658 KIAA1211Q6ZU35 1233 aa13.32□□□□□ -0.28
BEST3-209ENST00000548658 TDHQ8IZJ6 230 aa13.32□□□□□ -0.28
BEST3-209ENST00000548658 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
BEST3-209ENST00000548658 GLT1D1Q96MS3 346 aa13.32□□□□□ -0.28
BEST3-209ENST00000548658 TNKSO95271 1327 aa13.32□□□□□ -0.28
BEST3-209ENST00000548658 SYNRGQ9UMZ2 1314 aa13.32□□□□□ -0.28
BEST3-209ENST00000548658 LAMA4Q16363 1823 aa13.32□□□□□ -0.28
BEST3-209ENST00000548658 A0A1W2PQ45 241 aaPredicted RBP13.31□□□□□ -0.28
BEST3-209ENST00000548658 A0A1W2PQY0 241 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 ERICH2A1L162 156 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 SGSM2O43147 1006 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 C6orf222P0C671 652 aaPredicted RBP13.31□□□□□ -0.28
BEST3-209ENST00000548658 ACLYP53396 1101 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 GJA9P57773 515 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 NKX3-2P78367 333 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 TNFAIP2Q03169 654 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 BAATQ14032 418 aaPredicted RBP13.31□□□□□ -0.28
BEST3-209ENST00000548658 SART3Q15020 963 aaKnown RBP13.31□□□□□ -0.28
BEST3-209ENST00000548658 GNASQ5JWF2 1037 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 RNF207Q6ZRF8 634 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 NOL8Q76FK4 1167 aaKnown RBP13.31□□□□□ -0.28
BEST3-209ENST00000548658 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
BEST3-209ENST00000548658 RGS22Q8NE09 1264 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 TOX2Q96NM4 488 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 IL25Q9H293 177 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 VTA1Q9NP79 307 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 STARD7Q9NQZ5 370 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 Q9Y3F1 56 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 ELP1O95163 1332 aa13.31□□□□□ -0.28
BEST3-209ENST00000548658 GOLGA8HP0CJ92 632 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 MDM2Q00987 491 aaPredicted RBP13.3□□□□□ -0.28
BEST3-209ENST00000548658 KCNA10Q16322 511 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 LRIT3Q3SXY7 679 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 TRIM60Q495X7 471 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 CCSAPQ6IQ19 270 aaPredicted RBP13.3□□□□□ -0.28
BEST3-209ENST00000548658 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 MORC4Q8TE76 937 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 MAP4K1Q92918 833 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 AP5M1Q9H0R1 490 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 UPF3AQ9H1J1 476 aaKnown RBP13.3□□□□□ -0.28
BEST3-209ENST00000548658 RANBP2P49792 3224 aaKnown RBP13.3□□□□□ -0.28
BEST3-209ENST00000548658 MROH7Q68CQ1 1323 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 DNAH12Q6ZR08 3092 aa13.3□□□□□ -0.28
BEST3-209ENST00000548658 DCDC2CA8MYV0 355 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 NFIBO00712 420 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
BEST3-209ENST00000548658 ZEB2O60315 1214 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 CYP21A2P08686 494 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 RPS6P62753 249 aaKnown RBP13.29□□□□□ -0.28
BEST3-209ENST00000548658 TLE2Q04725 743 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 TRAF1Q13077 416 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 CDC37Q16543 378 aaPredicted RBP13.29□□□□□ -0.28
BEST3-209ENST00000548658 CENPQQ7L2Z9 268 aaPredicted RBP13.29□□□□□ -0.28
BEST3-209ENST00000548658 ANKRD33Q7Z3H0 272 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 ADGRF4Q8IZF3 695 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 CLEC4DQ8WXI8 215 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 VTI1AQ96AJ9 217 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 LENG1Q96BZ8 264 aaPredicted RBP13.29□□□□□ -0.28
BEST3-209ENST00000548658 SEZ6LQ9BYH1 1024 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 UBA5Q9GZZ9 404 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 PRDM5Q9NQX1 630 aaPredicted RBP13.29□□□□□ -0.28
BEST3-209ENST00000548658 ABCB11O95342 1321 aa13.29□□□□□ -0.28
BEST3-209ENST00000548658 IFIT3O14879 490 aaKnown RBP13.28□□□□□ -0.28
BEST3-209ENST00000548658 CABYRO75952 493 aa13.28□□□□□ -0.28
BEST3-209ENST00000548658 ASGR1P07306 291 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms