RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 HMGCRP04035 888 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 HMGB1P09429 215 aaKnown RBP10.16□□□□□ -0.78
SP1-203ENST00000548560 SNHG28P0DPA3 235 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 FCER1AP12319 257 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 SLC16A2P36021 539 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 GRB14Q14449 540 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 KCTD2Q14681 263 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 MORN1Q5T089 497 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 CCDC174Q6PII3 467 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 BTNL9Q6UXG8 535 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 DPP9Q86TI2 863 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 REPS2Q8NFH8 660 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 DDX12PQ92771 950 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 ZNF333Q96JL9 665 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 NEK1Q96PY6 1258 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 MMP19Q99542 508 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 RAVER2Q9HCJ3 691 aaKnown RBP10.16□□□□□ -0.78
SP1-203ENST00000548560 FBXO40Q9UH90 709 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 GJD2Q9UKL4 321 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 PNMA2Q9UL42 364 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 PRR12Q9ULL5 1215 aa10.16□□□□□ -0.78
SP1-203ENST00000548560 PDE4DIPQ5VU43 2346 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 MYCP01106 439 aaPredicted RBP10.15□□□□□ -0.78
SP1-203ENST00000548560 INHAP05111 366 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 GOLGA8HP0CJ92 632 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 XRCC5P13010 732 aaKnown RBP10.15□□□□□ -0.78
SP1-203ENST00000548560 ELNP15502 786 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 ADORA2AP29274 412 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 HSPA4P34932 840 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 ANTXR2P58335 489 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 FGD1P98174 961 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 HIC1Q14526 733 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 TKFCQ3LXA3 575 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 TSGA10IPQ3SY00 556 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 TTBK2Q6IQ55 1244 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 ABRAQ8N0Z2 381 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 TMTC2Q8N394 836 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 CHST13Q8NET6 341 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 CTCFLQ8NI51 663 aaPredicted RBP10.15□□□□□ -0.78
SP1-203ENST00000548560 NUP133Q8WUM0 1156 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 RANBP17Q9H2T7 1088 aaKnown RBP10.15□□□□□ -0.78
SP1-203ENST00000548560 ACAD9Q9H845 621 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 HOMER2Q9NSB8 354 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 CCPG1Q9ULG6 757 aa10.15□□□□□ -0.78
SP1-203ENST00000548560 BAZ2BQ9UIF8 2168 aaKnown RBP10.15□□□□□ -0.79
SP1-203ENST00000548560 WDR19Q8NEZ3 1342 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 SH2B2O14492 632 aaPredicted RBP10.14□□□□□ -0.79
SP1-203ENST00000548560 DDAH1O94760 285 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 ICAM1P05362 532 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 CALM1P0DP23 149 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 CALM2P0DP24 149 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 CALM3P0DP25 149 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 ALAS1P13196 640 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 PSMA5P28066 241 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 KIF5BP33176 963 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 SYNE3Q6ZMZ3 975 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 DHX32Q7L7V1 743 aaKnown RBP10.14□□□□□ -0.79
SP1-203ENST00000548560 ZNF654Q8IZM8 581 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 DDX11Q96FC9 970 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 JAKMIP1Q96N16 626 aaKnown RBP10.14□□□□□ -0.79
SP1-203ENST00000548560 LY9Q9HBG7 655 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 RNF146Q9NTX7 359 aa10.14□□□□□ -0.79
SP1-203ENST00000548560 LCTP09848 1927 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 HOXC6P09630 235 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 LIFRP42702 1097 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 SNAP25P60880 206 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 GRM4Q14833 912 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 CDC37Q16543 378 aaPredicted RBP10.13□□□□□ -0.79
SP1-203ENST00000548560 ADCK5Q3MIX3 580 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 MFSD14CQ5VZR4 134 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 BLOC1S2Q6QNY1 142 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 ANKRD35Q8N283 1001 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 OXER1Q8TDS5 423 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 IGDCC4Q8TDY8 1250 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 TRIB2Q92519 343 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 USP6NLQ92738 828 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 AGBL1Q96MI9 1066 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 TRERF1Q96PN7 1200 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 LRRC2Q9BYS8 371 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 UBA5Q9GZZ9 404 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 RNF208Q9H0X6 261 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 RIPK3Q9Y572 518 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 SNX14Q9Y5W7 946 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 SLC12A7Q9Y666 1083 aa10.13□□□□□ -0.79
SP1-203ENST00000548560 KIAA0100Q14667 2235 aaKnown RBP10.13□□□□□ -0.79
SP1-203ENST00000548560 PFASO15067 1338 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 ZNF536O15090 1300 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 KLRF2D3W0D1 207 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 CCL5P13501 91 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 CASTP20810 708 aaKnown RBP10.12□□□□□ -0.79
SP1-203ENST00000548560 CCL14Q16627 93 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 ADGRF4Q8IZF3 695 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 STAG2Q8N3U4 1231 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 KCNB2Q92953 911 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 MAP3K14Q99558 947 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 USP26Q9BXU7 913 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 CPVLQ9H3G5 476 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
SP1-203ENST00000548560 HMX1Q9NP08 348 aaPredicted RBP10.12□□□□□ -0.79
SP1-203ENST00000548560 MAD2L2Q9UI95 211 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms