RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 PALM3A6NDB9 673 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-204ENST00000547517 CCDC69A6NI79 296 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 LRRC37A2A6NM11 1700 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 SEPT4O43236 478 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 MSCO60682 206 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 LCTP09848 1927 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 TROAPQ12815 778 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 KRT32Q14532 448 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 LHX8Q68G74 356 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 ARMCX2Q7L311 632 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 MSL3Q8N5Y2 521 aaKnown RBP13.77□□□□□ -0.21
RAB5C-204ENST00000547517 FAM133AQ8N9E0 248 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 ANKLE1Q8NAG6 615 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 CLEC4DQ8WXI8 215 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 PAWRQ96IZ0 340 aaKnown RBP13.77□□□□□ -0.21
RAB5C-204ENST00000547517 SYNGAP1Q96PV0 1343 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 MTA3Q9BTC8 594 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 JMJD4Q9H9V9 463 aa13.77□□□□□ -0.21
RAB5C-204ENST00000547517 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.21
RAB5C-204ENST00000547517 SMCHD1A6NHR9 2005 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 ASTN1O14525 1302 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 ABCB11O95342 1321 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 SOWAHBA6NEL2 793 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 SNAI1O95863 264 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-204ENST00000547517 CAPN2P17655 700 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 RXRAP19793 462 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 CALML3P27482 149 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 HSPA4P34932 840 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 BAATQ14032 418 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-204ENST00000547517 MAMDC4Q6UXC1 1216 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 FBXO11Q86XK2 927 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 HOMER1Q86YM7 354 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 RAB11FIP4Q86YS3 637 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 CCDC144CPQ8IYA2 1237 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-204ENST00000547517 LENG1Q96BZ8 264 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-204ENST00000547517 PURBQ96QR8 312 aaKnown RBP13.76□□□□□ -0.21
RAB5C-204ENST00000547517 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
RAB5C-204ENST00000547517 NRBP1Q9UHY1 535 aa13.76□□□□□ -0.21
RAB5C-204ENST00000547517 DDX49Q9Y6V7 483 aaKnown RBP13.76□□□□□ -0.21
RAB5C-204ENST00000547517 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-204ENST00000547517 ZNF865P0CJ78 1059 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-204ENST00000547517 LIFRP42702 1097 aa13.75□□□□□ -0.21
RAB5C-204ENST00000547517 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
RAB5C-204ENST00000547517 SLC35G1Q2M3R5 365 aa13.75□□□□□ -0.21
RAB5C-204ENST00000547517 TSGA10IPQ3SY00 556 aa13.75□□□□□ -0.21
RAB5C-204ENST00000547517 RNF207Q6ZRF8 634 aa13.75□□□□□ -0.21
RAB5C-204ENST00000547517 NECAB2Q7Z6G3 386 aa13.75□□□□□ -0.21
RAB5C-204ENST00000547517 JAKMIP1Q96N16 626 aaKnown RBP13.75□□□□□ -0.21
RAB5C-204ENST00000547517 HTATIP2Q9BUP3 242 aa13.75□□□□□ -0.21
RAB5C-204ENST00000547517 C11orf49Q9H6J7 331 aa13.75□□□□□ -0.21
RAB5C-204ENST00000547517 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
RAB5C-204ENST00000547517 SLC12A7Q9Y666 1083 aa13.75□□□□□ -0.21
RAB5C-204ENST00000547517 MCM3APO60318 1980 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 MYH6P13533 1939 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 ZBTB5O15062 677 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 CYTH3O43739 400 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 PPP1R11O60927 126 aaPredicted RBP13.74□□□□□ -0.21
RAB5C-204ENST00000547517 RARBP10826 455 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 AKR1A1P14550 325 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 CPA1P15085 419 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 KIF5BP33176 963 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
RAB5C-204ENST00000547517 DHX32Q7L7V1 743 aaKnown RBP13.74□□□□□ -0.21
RAB5C-204ENST00000547517 MICU3Q86XE3 530 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 TMTC2Q8N394 836 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 PIBF1Q8WXW3 757 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 KCNB2Q92953 911 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 MTMR8Q96EF0 704 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 PIGSQ96S52 555 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
RAB5C-204ENST00000547517 ASB14A6NK59 587 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 DNM1LO00429 736 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 PLEKHA8P1O95397 391 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 HMGB1P09429 215 aaKnown RBP13.73□□□□□ -0.21
RAB5C-204ENST00000547517 CALM1P0DP23 149 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 CALM2P0DP24 149 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 CALM3P0DP25 149 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 ALDH5A1P51649 535 aaPredicted RBP13.73□□□□□ -0.21
RAB5C-204ENST00000547517 EXOSC10Q01780 885 aaKnown RBP13.73□□□□□ -0.21
RAB5C-204ENST00000547517 ACVR2BQ13705 512 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 SGMS1Q86VZ5 419 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 DPF3Q92784 378 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 MAP3K14Q99558 947 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 ABHD16BQ9H3Z7 469 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 RIOX1Q9H6W3 641 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
RAB5C-204ENST00000547517 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
RAB5C-204ENST00000547517 MRPL11Q9Y3B7 192 aaKnown RBP13.73□□□□□ -0.21
RAB5C-204ENST00000547517 KBTBD13C9JR72 458 aa13.72□□□□□ -0.21
RAB5C-204ENST00000547517 PGK1P00558 417 aa13.72□□□□□ -0.21
RAB5C-204ENST00000547517 FGD1P98174 961 aa13.72□□□□□ -0.21
RAB5C-204ENST00000547517 GJC2Q5T442 439 aaPredicted RBP13.72□□□□□ -0.21
RAB5C-204ENST00000547517 APOA5Q6Q788 366 aa13.72□□□□□ -0.21
RAB5C-204ENST00000547517 BLOC1S2Q6QNY1 142 aa13.72□□□□□ -0.21
RAB5C-204ENST00000547517 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
RAB5C-204ENST00000547517 EEPD1Q7L9B9 569 aa13.72□□□□□ -0.21
RAB5C-204ENST00000547517 FBXO16Q8IX29 292 aaPredicted RBP13.72□□□□□ -0.21
RAB5C-204ENST00000547517 KATNBL1Q9H079 304 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms