RNA–Protein interactions for RNA: ENST00000546723.5

RACGAP1-205, Transcript of Rac GTPase activating protein 1, human

TSL 2

Gene RACGAP1, Length 574 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-205	ENST00000546723	FANCB	Q8NB91	859 aa		11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	RGS22	Q8NE09	1264 aa		11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	TCEANC2	Q96MN5	208 aa		11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	MYL10	Q9BUA6	226 aa		11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	A1CF	Q9NQ94	594 aa	Known RBP	11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	PAK6	Q9NQU5	681 aa	Predicted RBP	11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CYP39A1	Q9NYL5	469 aa		11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	NRBP1	Q9UHY1	535 aa		11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CNPY2	Q9Y2B0	182 aa		11.8	□□□□□ -0.52
RACGAP1-205	ENST00000546723	ZSWIM8	A7E2V4	1837 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	PNMA6F	A0A0J9YX94	578 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723		B4DLN1	442 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	IGHA2	P01877	340 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CAST	P20810	708 aa	Known RBP	11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	RPS6KB1	P23443	525 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	MRPL12	P52815	198 aa	Known RBP	11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CNTN2	Q02246	1040 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	COL9A3	Q14050	684 aa	Predicted RBP	11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	PRAMEF19	Q5SWL8	479 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	MAMDC4	Q6UXC1	1216 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	RNF207	Q6ZRF8	634 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723		Q6ZUG5	572 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	RUFY3	Q7L099	469 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	HOMER1	Q86YM7	354 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	MTMR8	Q96EF0	704 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	RRP36	Q96EU6	259 aa	Known RBP	11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	PIGS	Q96S52	555 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	MPHOSPH6	Q99547	160 aa	Known RBP	11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	TM6SF1	Q9BZW5	370 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	RBM28	Q9NW13	759 aa	Known RBP	11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	ADD3	Q9UEY8	706 aa	Known RBP	11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	PCDHA1	Q9Y5I3	950 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CYP46A1	Q9Y6A2	500 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	MYH4	Q9Y623	1939 aa		11.79	□□□□□ -0.52
RACGAP1-205	ENST00000546723	RLF	Q13129	1914 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	KLF18	A0A0U1RQI7	1052 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	NFIB	O00712	420 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	ZBTB43	O43298	467 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CYBA	P13498	195 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CPA1	P15085	419 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	RXRA	P19793	462 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CALML3	P27482	149 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	PPP2R5B	Q15173	497 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	APOA5	Q6Q788	366 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	MICU3	Q86XE3	530 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CCDC144CP	Q8IYA2	1237 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	SAMD3	Q8N6K7	520 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	FAM133A	Q8N9E0	248 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CLEC4D	Q8WXI8	215 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	BRF1	Q92994	677 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	SPZ1	Q9BXG8	430 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CRISPLD2	Q9H0B8	497 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	ZSWIM6	Q9HCJ5	1215 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	SEC63	Q9UGP8	760 aa	Known RBP	11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	DDX20	Q9UHI6	824 aa	Known RBP	11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	LAMA4	Q16363	1823 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	SYNGAP1	Q96PV0	1343 aa		11.78	□□□□□ -0.52
RACGAP1-205	ENST00000546723	CCDC196	A0A1B0GTZ2	297 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	SOWAHB	A6NEL2	793 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	SEPT4	O43236	478 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	CYTH3	O43739	400 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	SNAI1	O95863	264 aa	Predicted RBP	11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	TAL1	P17542	331 aa	Predicted RBP	11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	RCAN1	P53805	252 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	ANAPC15	P60006	121 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	RAB11FIP4	Q86YS3	637 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	FBXL16	Q8N461	479 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	CCDC82	Q8N4S0	544 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	SRBD1	Q8N5C6	995 aa	Known RBP	11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	ANKLE1	Q8NAG6	615 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	PIBF1	Q8WXW3	757 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	ABHD16B	Q9H3Z7	469 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	MAP3K20	Q9NYL2	800 aa	Known RBP	11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	OGDHL	Q9ULD0	1010 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	BRPF3	Q9ULD4	1205 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	FAM184B	Q9ULE4	1060 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	PCNT	O95613	3336 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723		A0A0G2JMZ2	1700 aa		11.77	□□□□□ -0.53
RACGAP1-205	ENST00000546723	MGAM	O43451	1857 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	LOC102724159	A0A0B4J2E5	919 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	GOLGA8A	A7E2F4	631 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	GOLGA8B	A8MQT2	603 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	PLEKHA8P1	O95397	391 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	CFB	P00751	764 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	AKR1A1	P14550	325 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	RPS6	P62753	249 aa	Known RBP	11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	APOBR	Q0VD83	1088 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	ACVR2B	Q13705	512 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	PWP2	Q15269	919 aa	Known RBP	11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	RTN1	Q16799	776 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	LHX8	Q68G74	356 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	ARMCX2	Q7L311	632 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	ARRDC4	Q8NCT1	418 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	TRPV1	Q8NER1	839 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	DNER	Q8NFT8	737 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	PDRG1	Q9NUG6	133 aa		11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.76	□□□□□ -0.53
RACGAP1-205	ENST00000546723	FARP2	O94887	1054 aa	Predicted RBP	11.75	□□□□□ -0.53

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